Cluster: HRGMv2_4319_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00193
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4319_49 | HRGMv2_4319_49_2 | 97 | 1218 | - | CE2 |
| CAZyme | HRGMv2_4319_49 | HRGMv2_4319_49_3 | 1222 | 2244 | - | GH130_2 |
| CAZyme | HRGMv2_4319_49 | HRGMv2_4319_49_4 | 2271 | 3434 | - | GH130_1 |
| pfam | HRGMv2_4319_49 | HRGMv2_4319_49_5 | 3424 | 4638 | - | GlcNAc_2-epim |
| TC | HRGMv2_4319_49 | HRGMv2_4319_49_6 | 4659 | 5540 | - | 3.A.1.1.18 |
| TC | HRGMv2_4319_49 | HRGMv2_4319_49_7 | 5537 | 6535 | - | 3.A.1.1.23 |
Gene ID: HRGMv2_4319_49_2
Type: CAZyme
Location: 97 - 1218 (-)
Type: CAZyme
Location: 97 - 1218 (-)
Gene ID: HRGMv2_4319_49_3
Type: CAZyme
Location: 1222 - 2244 (-)
Type: CAZyme
Location: 1222 - 2244 (-)
Gene ID: HRGMv2_4319_49_4
Type: CAZyme
Location: 2271 - 3434 (-)
Type: CAZyme
Location: 2271 - 3434 (-)
Gene ID: HRGMv2_4319_49_5
Type: pfam
Location: 3424 - 4638 (-)
Type: pfam
Location: 3424 - 4638 (-)
Gene ID: HRGMv2_4319_49_6
Type: TC
Location: 4659 - 5540 (-)
Type: TC
Location: 4659 - 5540 (-)
Gene ID: HRGMv2_4319_49_7
Type: TC
Location: 5537 - 6535 (-)
Type: TC
Location: 5537 - 6535 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4319_49_3 | vegetarian > omnivore | 1.10000 | 0.02254 |