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Cluster: HRGMv2_4319_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4319_38 HRGMv2_4319_38_6 4190 5029 - 3.A.1.1.11
TC HRGMv2_4319_38 HRGMv2_4319_38_7 5048 5935 - 3.A.1.1.11
TC HRGMv2_4319_38 HRGMv2_4319_38_8 5961 7316 - 3.A.1.1.11
CAZyme HRGMv2_4319_38 HRGMv2_4319_38_9 7344 8459 - GH105
pfam HRGMv2_4319_38 HRGMv2_4319_38_10 8453 9439 - GFO_IDH_MocA
TC HRGMv2_4319_38 HRGMv2_4319_38_11 9724 11463 + 8.A.59.2.1
TF HRGMv2_4319_38 HRGMv2_4319_38_12 11464 12984 + HTH_AraC
NULL(UNKNOWN) HRGMv2_4319_38 HRGMv2_4319_38_13 13181 13864 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4319_38 HRGMv2_4319_38_14 14091 15749 - GH13_36
TC HRGMv2_4319_38 HRGMv2_4319_38_15 15749 17026 - 2.A.49.9.2
Gene ID: HRGMv2_4319_38_6
Type: TC
Location: 4190 - 5029 (-)
Gene ID: HRGMv2_4319_38_7
Type: TC
Location: 5048 - 5935 (-)
Gene ID: HRGMv2_4319_38_8
Type: TC
Location: 5961 - 7316 (-)
Gene ID: HRGMv2_4319_38_9
Type: CAZyme
Location: 7344 - 8459 (-)
Gene ID: HRGMv2_4319_38_10
Type: pfam
Location: 8453 - 9439 (-)
Gene ID: HRGMv2_4319_38_11
Type: TC
Location: 9724 - 11463 (+)
Gene ID: HRGMv2_4319_38_12
Type: TF
Location: 11464 - 12984 (+)
Gene ID: HRGMv2_4319_38_13
Type:
Location: 13181 - 13864 (-)
Gene ID: HRGMv2_4319_38_14
Type: CAZyme
Location: 14091 - 15749 (-)
Gene ID: HRGMv2_4319_38_15
Type: TC
Location: 15749 - 17026 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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