Cluster: HRGMv2_4319_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4319
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4319_17 | HRGMv2_4319_17_1 | 1 | 450 | - | 3.A.1.1.46 |
| TC | HRGMv2_4319_17 | HRGMv2_4319_17_2 | 467 | 1393 | - | 3.A.1.1.20 |
| pfam | HRGMv2_4319_17 | HRGMv2_4319_17_3 | 1390 | 2382 | - | Hydrolase | HAD_2 |
| CAZyme | HRGMv2_4319_17 | HRGMv2_4319_17_4 | 2357 | 5239 | - | GH38 |
| STP | HRGMv2_4319_17 | HRGMv2_4319_17_5 | 5291 | 6220 | - | AraC_binding | HTH_18 |
| STP | HRGMv2_4319_17 | HRGMv2_4319_17_6 | 6320 | 7849 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4319_17 | HRGMv2_4319_17_7 | 8024 | 9742 | - | GH31_14 |
Gene ID: HRGMv2_4319_17_1
Type: TC
Location: 1 - 450 (-)
Type: TC
Location: 1 - 450 (-)
Gene ID: HRGMv2_4319_17_2
Type: TC
Location: 467 - 1393 (-)
Type: TC
Location: 467 - 1393 (-)
Gene ID: HRGMv2_4319_17_3
Type: pfam
Location: 1390 - 2382 (-)
Type: pfam
Location: 1390 - 2382 (-)
Gene ID: HRGMv2_4319_17_4
Type: CAZyme
Location: 2357 - 5239 (-)
Type: CAZyme
Location: 2357 - 5239 (-)
Gene ID: HRGMv2_4319_17_5
Type: STP
Location: 5291 - 6220 (-)
Type: STP
Location: 5291 - 6220 (-)
Gene ID: HRGMv2_4319_17_6
Type: STP
Location: 6320 - 7849 (-)
Type: STP
Location: 6320 - 7849 (-)
Gene ID: HRGMv2_4319_17_7
Type: CAZyme
Location: 8024 - 9742 (-)
Type: CAZyme
Location: 8024 - 9742 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.