Cluster: HRGMv2_4319_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_4319
- CGC Family ID: CGCFAM_00003
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4319_13 | HRGMv2_4319_13_2 | 1799 | 3916 | - | GH73 |
| CAZyme | HRGMv2_4319_13 | HRGMv2_4319_13_3 | 4026 | 4763 | - | GT2 |
| pfam | HRGMv2_4319_13 | HRGMv2_4319_13_4 | 4765 | 5661 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| TC | HRGMv2_4319_13 | HRGMv2_4319_13_5 | 6092 | 6715 | - | 9.B.18.1.3 |
| TC | HRGMv2_4319_13 | HRGMv2_4319_13_6 | 6727 | 8604 | - | 9.B.18.2.1 |
| CAZyme | HRGMv2_4319_13 | HRGMv2_4319_13_7 | 8601 | 9581 | - | GT2 |
| CAZyme | HRGMv2_4319_13 | HRGMv2_4319_13_8 | 9566 | 10765 | - | GT4 |
| CAZyme | HRGMv2_4319_13 | HRGMv2_4319_13_9 | 10762 | 12165 | - | GT4 |
| pfam | HRGMv2_4319_13 | HRGMv2_4319_13_10 | 12177 | 13310 | - | EpsG |
| CAZyme | HRGMv2_4319_13 | HRGMv2_4319_13_11 | 13365 | 14147 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4319_13 | HRGMv2_4319_13_12 | 14137 | 15198 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4319_13 | HRGMv2_4319_13_13 | 15215 | 16663 | - | 9.B.18.1.2 |
| CAZyme | HRGMv2_4319_13 | HRGMv2_4319_13_14 | 16691 | 17458 | - | GT2 |
Gene ID: HRGMv2_4319_13_2
Type: CAZyme
Location: 1799 - 3916 (-)
Type: CAZyme
Location: 1799 - 3916 (-)
Gene ID: HRGMv2_4319_13_3
Type: CAZyme
Location: 4026 - 4763 (-)
Type: CAZyme
Location: 4026 - 4763 (-)
Gene ID: HRGMv2_4319_13_4
Type: pfam
Location: 4765 - 5661 (-)
Type: pfam
Location: 4765 - 5661 (-)
Gene ID: HRGMv2_4319_13_5
Type: TC
Location: 6092 - 6715 (-)
Type: TC
Location: 6092 - 6715 (-)
Gene ID: HRGMv2_4319_13_6
Type: TC
Location: 6727 - 8604 (-)
Type: TC
Location: 6727 - 8604 (-)
Gene ID: HRGMv2_4319_13_7
Type: CAZyme
Location: 8601 - 9581 (-)
Type: CAZyme
Location: 8601 - 9581 (-)
Gene ID: HRGMv2_4319_13_8
Type: CAZyme
Location: 9566 - 10765 (-)
Type: CAZyme
Location: 9566 - 10765 (-)
Gene ID: HRGMv2_4319_13_9
Type: CAZyme
Location: 10762 - 12165 (-)
Type: CAZyme
Location: 10762 - 12165 (-)
Gene ID: HRGMv2_4319_13_10
Type: pfam
Location: 12177 - 13310 (-)
Type: pfam
Location: 12177 - 13310 (-)
Gene ID: HRGMv2_4319_13_11
Type: CAZyme
Location: 13365 - 14147 (-)
Type: CAZyme
Location: 13365 - 14147 (-)
Gene ID: HRGMv2_4319_13_12
Type:
Location: 14137 - 15198 (-)
Type:
Location: 14137 - 15198 (-)
Gene ID: HRGMv2_4319_13_13
Type: TC
Location: 15215 - 16663 (-)
Type: TC
Location: 15215 - 16663 (-)
Gene ID: HRGMv2_4319_13_14
Type: CAZyme
Location: 16691 - 17458 (-)
Type: CAZyme
Location: 16691 - 17458 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor stercoripullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.