Cluster: HRGMv2_4318_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4318
- CGC Family ID: CGCFAM_00411
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4318_22 | HRGMv2_4318_22_9 | 6835 | 9396 | - | 3.A.12.1.1 |
| peptidase | HRGMv2_4318_22 | HRGMv2_4318_22_10 | 9463 | 10146 | - | S14.UPW |
| CAZyme | HRGMv2_4318_22 | HRGMv2_4318_22_11 | 10305 | 11774 | - | GT5 |
| STP | HRGMv2_4318_22 | HRGMv2_4318_22_12 | 11774 | 13054 | - | Aminotran_1_2 |
| peptidase | HRGMv2_4318_22 | HRGMv2_4318_22_13 | 13093 | 13821 | - | M20.UNW |
| TC | HRGMv2_4318_22 | HRGMv2_4318_22_14 | 13884 | 14777 | - | 9.A.40.2.2 |
Gene ID: HRGMv2_4318_22_9
Type: TC
Location: 6835 - 9396 (-)
Type: TC
Location: 6835 - 9396 (-)
Gene ID: HRGMv2_4318_22_10
Type: peptidase
Location: 9463 - 10146 (-)
Type: peptidase
Location: 9463 - 10146 (-)
Gene ID: HRGMv2_4318_22_11
Type: CAZyme
Location: 10305 - 11774 (-)
Type: CAZyme
Location: 10305 - 11774 (-)
Gene ID: HRGMv2_4318_22_12
Type: STP
Location: 11774 - 13054 (-)
Type: STP
Location: 11774 - 13054 (-)
Gene ID: HRGMv2_4318_22_13
Type: peptidase
Location: 13093 - 13821 (-)
Type: peptidase
Location: 13093 - 13821 (-)
Gene ID: HRGMv2_4318_22_14
Type: TC
Location: 13884 - 14777 (-)
Type: TC
Location: 13884 - 14777 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotonthovivens
Species
Brotonthovivens avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.