dbCAN Logo

Cluster: HRGMv2_4318_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4318_20 HRGMv2_4318_20_29 26396 27376 + 3.A.1.5.11
TC HRGMv2_4318_20 HRGMv2_4318_20_30 27373 28179 + 3.A.1.5.27
TC HRGMv2_4318_20 HRGMv2_4318_20_31 28210 29748 + 3.A.1.5.18
TC HRGMv2_4318_20 HRGMv2_4318_20_32 29775 30752 + 3.A.1.5.2
TC HRGMv2_4318_20 HRGMv2_4318_20_33 30739 31497 + 3.A.1.5.20
TC HRGMv2_4318_20 HRGMv2_4318_20_34 31728 33092 + 2.A.66.1.32
pfam HRGMv2_4318_20 HRGMv2_4318_20_35 33099 34568 - HTH_30
pfam HRGMv2_4318_20 HRGMv2_4318_20_36 34757 35599 + Chalcone_N
CAZyme HRGMv2_4318_20 HRGMv2_4318_20_37 35724 36821 + GT2
Gene ID: HRGMv2_4318_20_29
Type: TC
Location: 26396 - 27376 (+)
Gene ID: HRGMv2_4318_20_30
Type: TC
Location: 27373 - 28179 (+)
Gene ID: HRGMv2_4318_20_31
Type: TC
Location: 28210 - 29748 (+)
Gene ID: HRGMv2_4318_20_32
Type: TC
Location: 29775 - 30752 (+)
Gene ID: HRGMv2_4318_20_33
Type: TC
Location: 30739 - 31497 (+)
Gene ID: HRGMv2_4318_20_34
Type: TC
Location: 31728 - 33092 (+)
Gene ID: HRGMv2_4318_20_35
Type: pfam
Location: 33099 - 34568 (-)
Gene ID: HRGMv2_4318_20_36
Type: pfam
Location: 34757 - 35599 (+)
Gene ID: HRGMv2_4318_20_37
Type: CAZyme
Location: 35724 - 36821 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List