Cluster: HRGMv2_4318_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4318
- CGC Family ID: CGCFAM_04055
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4318_15 | HRGMv2_4318_15_8 | 6287 | 6982 | + | 3.A.1.125.3 |
| pfam | HRGMv2_4318_15 | HRGMv2_4318_15_9 | 6966 | 9527 | + | FtsX |
| TC | HRGMv2_4318_15 | HRGMv2_4318_15_10 | 9701 | 10390 | + | 3.A.1.125.3 |
| NULL(UNKNOWN) | HRGMv2_4318_15 | HRGMv2_4318_15_11 | 10378 | 11235 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4318_15 | HRGMv2_4318_15_12 | 11232 | 12500 | + | GT2 |
| pfam | HRGMv2_4318_15 | HRGMv2_4318_15_13 | 12595 | 12921 | - | DUF1292 |
| TC | HRGMv2_4318_15 | HRGMv2_4318_15_14 | 13109 | 13342 | + | 3.D.1.6.4 |
Gene ID: HRGMv2_4318_15_8
Type: TC
Location: 6287 - 6982 (+)
Type: TC
Location: 6287 - 6982 (+)
Gene ID: HRGMv2_4318_15_9
Type: pfam
Location: 6966 - 9527 (+)
Type: pfam
Location: 6966 - 9527 (+)
Gene ID: HRGMv2_4318_15_10
Type: TC
Location: 9701 - 10390 (+)
Type: TC
Location: 9701 - 10390 (+)
Gene ID: HRGMv2_4318_15_11
Type:
Location: 10378 - 11235 (+)
Type:
Location: 10378 - 11235 (+)
Gene ID: HRGMv2_4318_15_12
Type: CAZyme
Location: 11232 - 12500 (+)
Type: CAZyme
Location: 11232 - 12500 (+)
Gene ID: HRGMv2_4318_15_13
Type: pfam
Location: 12595 - 12921 (-)
Type: pfam
Location: 12595 - 12921 (-)
Gene ID: HRGMv2_4318_15_14
Type: TC
Location: 13109 - 13342 (+)
Type: TC
Location: 13109 - 13342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotonthovivens
Species
Brotonthovivens avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.