Cluster: HRGMv2_4318_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4318
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4318_13 | HRGMv2_4318_13_4 | 3199 | 4263 | - | 3.A.1.11.7 |
| TC | HRGMv2_4318_13 | HRGMv2_4318_13_5 | 4260 | 5045 | - | 3.A.1.11.8 |
| TC | HRGMv2_4318_13 | HRGMv2_4318_13_6 | 5039 | 5857 | - | 3.A.1.11.2 |
| TC | HRGMv2_4318_13 | HRGMv2_4318_13_7 | 5850 | 6926 | - | 3.A.1.11.8 |
| TF | HRGMv2_4318_13 | HRGMv2_4318_13_8 | 6940 | 7497 | - | HTH_3 |
| pfam | HRGMv2_4318_13 | HRGMv2_4318_13_9 | 7825 | 9699 | - | PEPCK_ATP | DUF4914 |
| CAZyme | HRGMv2_4318_13 | HRGMv2_4318_13_10 | 9963 | 10595 | - | CE4 |
Gene ID: HRGMv2_4318_13_4
Type: TC
Location: 3199 - 4263 (-)
Type: TC
Location: 3199 - 4263 (-)
Gene ID: HRGMv2_4318_13_5
Type: TC
Location: 4260 - 5045 (-)
Type: TC
Location: 4260 - 5045 (-)
Gene ID: HRGMv2_4318_13_6
Type: TC
Location: 5039 - 5857 (-)
Type: TC
Location: 5039 - 5857 (-)
Gene ID: HRGMv2_4318_13_7
Type: TC
Location: 5850 - 6926 (-)
Type: TC
Location: 5850 - 6926 (-)
Gene ID: HRGMv2_4318_13_8
Type: TF
Location: 6940 - 7497 (-)
Type: TF
Location: 6940 - 7497 (-)
Gene ID: HRGMv2_4318_13_9
Type: pfam
Location: 7825 - 9699 (-)
Type: pfam
Location: 7825 - 9699 (-)
Gene ID: HRGMv2_4318_13_10
Type: CAZyme
Location: 9963 - 10595 (-)
Type: CAZyme
Location: 9963 - 10595 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotonthovivens
Species
Brotonthovivens avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.