Cluster: HRGMv2_4318_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4318
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4318_61 | HRGMv2_4318_61_12 | 10769 | 12181 | + | 2.A.50.2.1 |
| pfam | HRGMv2_4318_61 | HRGMv2_4318_61_13 | 12194 | 13321 | + | DHHW | ALGX |
| TF | HRGMv2_4318_61 | HRGMv2_4318_61_14 | 13351 | 14334 | + | LacI |
| TC | HRGMv2_4318_61 | HRGMv2_4318_61_15 | 14655 | 16547 | + | 4.A.1.2.12 |
| CAZyme | HRGMv2_4318_61 | HRGMv2_4318_61_16 | 16562 | 18004 | + | GH32 |
| TC | HRGMv2_4318_61 | HRGMv2_4318_61_17 | 18020 | 19630 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_4318_61_12
Type: TC
Location: 10769 - 12181 (+)
Type: TC
Location: 10769 - 12181 (+)
Gene ID: HRGMv2_4318_61_13
Type: pfam
Location: 12194 - 13321 (+)
Type: pfam
Location: 12194 - 13321 (+)
Gene ID: HRGMv2_4318_61_14
Type: TF
Location: 13351 - 14334 (+)
Type: TF
Location: 13351 - 14334 (+)
Gene ID: HRGMv2_4318_61_15
Type: TC
Location: 14655 - 16547 (+)
Type: TC
Location: 14655 - 16547 (+)
Gene ID: HRGMv2_4318_61_16
Type: CAZyme
Location: 16562 - 18004 (+)
Type: CAZyme
Location: 16562 - 18004 (+)
Gene ID: HRGMv2_4318_61_17
Type: TC
Location: 18020 - 19630 (+)
Type: TC
Location: 18020 - 19630 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotonthovivens
Species
Brotonthovivens avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.