Cluster: HRGMv2_4318_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4318
- CGC Family ID: CGCFAM_06420
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4318_11 | HRGMv2_4318_11_31 | 37323 | 38987 | - | GH13_29 |
| TC | HRGMv2_4318_11 | HRGMv2_4318_11_32 | 39043 | 41007 | - | 4.A.1.2.13 |
| TF | HRGMv2_4318_11 | HRGMv2_4318_11_33 | 41244 | 41978 | + | GntR |
| TC | HRGMv2_4318_11 | HRGMv2_4318_11_34 | 41971 | 43878 | - | 3.A.3.6.16 |
| pfam | HRGMv2_4318_11 | HRGMv2_4318_11_35 | 44085 | 44384 | - | Trns_repr_metal |
| TC | HRGMv2_4318_11 | HRGMv2_4318_11_36 | 44385 | 45884 | - | 3.A.1.12.8 |
| TC | HRGMv2_4318_11 | HRGMv2_4318_11_37 | 45967 | 46746 | - | 3.A.1.12.4 |
Gene ID: HRGMv2_4318_11_31
Type: CAZyme
Location: 37323 - 38987 (-)
Type: CAZyme
Location: 37323 - 38987 (-)
Gene ID: HRGMv2_4318_11_32
Type: TC
Location: 39043 - 41007 (-)
Type: TC
Location: 39043 - 41007 (-)
Gene ID: HRGMv2_4318_11_33
Type: TF
Location: 41244 - 41978 (+)
Type: TF
Location: 41244 - 41978 (+)
Gene ID: HRGMv2_4318_11_34
Type: TC
Location: 41971 - 43878 (-)
Type: TC
Location: 41971 - 43878 (-)
Gene ID: HRGMv2_4318_11_35
Type: pfam
Location: 44085 - 44384 (-)
Type: pfam
Location: 44085 - 44384 (-)
Gene ID: HRGMv2_4318_11_36
Type: TC
Location: 44385 - 45884 (-)
Type: TC
Location: 44385 - 45884 (-)
Gene ID: HRGMv2_4318_11_37
Type: TC
Location: 45967 - 46746 (-)
Type: TC
Location: 45967 - 46746 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotonthovivens
Species
Brotonthovivens avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.