dbCAN Logo

Cluster: HRGMv2_4318_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4318_54 HRGMv2_4318_54_46 59166 60590 - AA7
TF HRGMv2_4318_54 HRGMv2_4318_54_47 60860 61534 - GntR
TC HRGMv2_4318_54 HRGMv2_4318_54_48 61577 62170 - 2.A.115.2.14
TC HRGMv2_4318_54 HRGMv2_4318_54_49 62182 62874 - 2.A.122.1.4
TC HRGMv2_4318_54 HRGMv2_4318_54_50 62867 63229 - 1.E.14.1.6
pfam HRGMv2_4318_54 HRGMv2_4318_54_51 63328 64191 - VCA0040-like
TC HRGMv2_4318_54 HRGMv2_4318_54_52 64257 67802 - 3.A.1.122.2
TC HRGMv2_4318_54 HRGMv2_4318_54_53 68007 68873 - 2.A.7.2.1
Gene ID: HRGMv2_4318_54_46
Type: CAZyme
Location: 59166 - 60590 (-)
Gene ID: HRGMv2_4318_54_47
Type: TF
Location: 60860 - 61534 (-)
Gene ID: HRGMv2_4318_54_48
Type: TC
Location: 61577 - 62170 (-)
Gene ID: HRGMv2_4318_54_49
Type: TC
Location: 62182 - 62874 (-)
Gene ID: HRGMv2_4318_54_50
Type: TC
Location: 62867 - 63229 (-)
Gene ID: HRGMv2_4318_54_51
Type: pfam
Location: 63328 - 64191 (-)
Gene ID: HRGMv2_4318_54_52
Type: TC
Location: 64257 - 67802 (-)
Gene ID: HRGMv2_4318_54_53
Type: TC
Location: 68007 - 68873 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List