dbCAN Logo

Cluster: HRGMv2_4318_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4318_46 HRGMv2_4318_46_58 64145 66340 + GH36
TF HRGMv2_4318_46 HRGMv2_4318_46_59 66365 67378 + LacI
CAZyme HRGMv2_4318_46 HRGMv2_4318_46_60 67614 69311 + GH13_31
STP HRGMv2_4318_46 HRGMv2_4318_46_61 69308 70618 + SBP_bac_1
TC HRGMv2_4318_46 HRGMv2_4318_46_62 70622 71491 + 3.A.1.1.28
TC HRGMv2_4318_46 HRGMv2_4318_46_63 71488 72339 + 3.A.1.1.28
CAZyme HRGMv2_4318_46 HRGMv2_4318_46_64 72361 74160 + GH13_4
Gene ID: HRGMv2_4318_46_58
Type: CAZyme
Location: 64145 - 66340 (+)
Gene ID: HRGMv2_4318_46_59
Type: TF
Location: 66365 - 67378 (+)
Gene ID: HRGMv2_4318_46_60
Type: CAZyme
Location: 67614 - 69311 (+)
Gene ID: HRGMv2_4318_46_61
Type: STP
Location: 69308 - 70618 (+)
Gene ID: HRGMv2_4318_46_62
Type: TC
Location: 70622 - 71491 (+)
Gene ID: HRGMv2_4318_46_63
Type: TC
Location: 71488 - 72339 (+)
Gene ID: HRGMv2_4318_46_64
Type: CAZyme
Location: 72361 - 74160 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List