Cluster: HRGMv2_4316_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4316
- CGC Family ID: CGCFAM_03429
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4316_15 | HRGMv2_4316_15_17 | 18870 | 20480 | + | 2.A.66.2.14 |
| pfam | HRGMv2_4316_15 | HRGMv2_4316_15_18 | 20625 | 21206 | + | BofC_C |
| CAZyme | HRGMv2_4316_15 | HRGMv2_4316_15_19 | 21466 | 23511 | + | GH13_39 |
| pfam | HRGMv2_4316_15 | HRGMv2_4316_15_20 | 23501 | 24160 | + | PseudoU_synth_2 |
| TC | HRGMv2_4316_15 | HRGMv2_4316_15_21 | 24455 | 26902 | + | 3.A.9.1.2 |
| CAZyme | HRGMv2_4316_15 | HRGMv2_4316_15_22 | 27282 | 28550 | - | GT2 |
Gene ID: HRGMv2_4316_15_17
Type: TC
Location: 18870 - 20480 (+)
Type: TC
Location: 18870 - 20480 (+)
Gene ID: HRGMv2_4316_15_18
Type: pfam
Location: 20625 - 21206 (+)
Type: pfam
Location: 20625 - 21206 (+)
Gene ID: HRGMv2_4316_15_19
Type: CAZyme
Location: 21466 - 23511 (+)
Type: CAZyme
Location: 21466 - 23511 (+)
Gene ID: HRGMv2_4316_15_20
Type: pfam
Location: 23501 - 24160 (+)
Type: pfam
Location: 23501 - 24160 (+)
Gene ID: HRGMv2_4316_15_21
Type: TC
Location: 24455 - 26902 (+)
Type: TC
Location: 24455 - 26902 (+)
Gene ID: HRGMv2_4316_15_22
Type: CAZyme
Location: 27282 - 28550 (-)
Type: CAZyme
Location: 27282 - 28550 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Anaerotignaceae
Genus
Neoanaerotignum_A
Species
Neoanaerotignum_A sp019422065
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.