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Cluster: HRGMv2_4316_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4316_10 HRGMv2_4316_10_60 69963 71438 - 9.A.11.1.2
pfam HRGMv2_4316_10 HRGMv2_4316_10_61 71551 72687 - OEP | OEP
pfam HRGMv2_4316_10 HRGMv2_4316_10_62 72710 73471 - Cu_amine_oxidN1
CAZyme HRGMv2_4316_10 HRGMv2_4316_10_63 73665 74219 + CE4
TF HRGMv2_4316_10 HRGMv2_4316_10_64 74447 74899 + MarR
pfam HRGMv2_4316_10 HRGMv2_4316_10_65 74913 76313 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC HRGMv2_4316_10 HRGMv2_4316_10_66 76317 79460 + 2.A.6.3.6
TC HRGMv2_4316_10 HRGMv2_4316_10_67 79776 80873 + 3.A.1.17.6
peptidase HRGMv2_4316_10 HRGMv2_4316_10_68 80870 82045 + M20.UPW
TC HRGMv2_4316_10 HRGMv2_4316_10_69 82263 82742 + 2.A.51.1.6
TC HRGMv2_4316_10 HRGMv2_4316_10_70 82739 83308 + 2.A.51.1.6
NULL(UNKNOWN) HRGMv2_4316_10 HRGMv2_4316_10_71 83305 83988 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4316_10 HRGMv2_4316_10_72 84048 84875 - 3.A.1.23.2
pfam HRGMv2_4316_10 HRGMv2_4316_10_73 84875 85645 - CbiQ
pfam HRGMv2_4316_10 HRGMv2_4316_10_74 85658 85960 - CbiN
TC HRGMv2_4316_10 HRGMv2_4316_10_75 85963 86712 - 3.A.1.23.8
Gene ID: HRGMv2_4316_10_60
Type: TC
Location: 69963 - 71438 (-)
Gene ID: HRGMv2_4316_10_61
Type: pfam
Location: 71551 - 72687 (-)
Gene ID: HRGMv2_4316_10_62
Type: pfam
Location: 72710 - 73471 (-)
Gene ID: HRGMv2_4316_10_63
Type: CAZyme
Location: 73665 - 74219 (+)
Gene ID: HRGMv2_4316_10_64
Type: TF
Location: 74447 - 74899 (+)
Gene ID: HRGMv2_4316_10_65
Type: pfam
Location: 74913 - 76313 (+)
Gene ID: HRGMv2_4316_10_66
Type: TC
Location: 76317 - 79460 (+)
Gene ID: HRGMv2_4316_10_67
Type: TC
Location: 79776 - 80873 (+)
Gene ID: HRGMv2_4316_10_68
Type: peptidase
Location: 80870 - 82045 (+)
Gene ID: HRGMv2_4316_10_69
Type: TC
Location: 82263 - 82742 (+)
Gene ID: HRGMv2_4316_10_70
Type: TC
Location: 82739 - 83308 (+)
Gene ID: HRGMv2_4316_10_71
Type:
Location: 83305 - 83988 (-)
Gene ID: HRGMv2_4316_10_72
Type: TC
Location: 84048 - 84875 (-)
Gene ID: HRGMv2_4316_10_73
Type: pfam
Location: 84875 - 85645 (-)
Gene ID: HRGMv2_4316_10_74
Type: pfam
Location: 85658 - 85960 (-)
Gene ID: HRGMv2_4316_10_75
Type: TC
Location: 85963 - 86712 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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