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Cluster: HRGMv2_4316_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4316_6 HRGMv2_4316_6_67 64845 66413 + 2.A.66.4.3
TC HRGMv2_4316_6 HRGMv2_4316_6_68 66410 67822 + 9.B.67.1.1
CAZyme HRGMv2_4316_6 HRGMv2_4316_6_69 67825 68943 + GT4
pfam HRGMv2_4316_6 HRGMv2_4316_6_70 68945 69409 + DUF4330
pfam HRGMv2_4316_6 HRGMv2_4316_6_71 69422 69913 + DUF4330
CAZyme HRGMv2_4316_6 HRGMv2_4316_6_72 69927 72158 + GT4
CAZyme HRGMv2_4316_6 HRGMv2_4316_6_73 72179 72910 + GT26
pfam HRGMv2_4316_6 HRGMv2_4316_6_74 72992 73834 + YitT_membrane | DUF2179
TF HRGMv2_4316_6 HRGMv2_4316_6_75 74200 75291 + 0037176
TC HRGMv2_4316_6 HRGMv2_4316_6_76 75323 76009 + 3.A.1.140.1
pfam HRGMv2_4316_6 HRGMv2_4316_6_77 75999 76898 + FtsX | FtsX_ECD
TC HRGMv2_4316_6 HRGMv2_4316_6_78 77030 78214 + 9.B.174.1.1
TC HRGMv2_4316_6 HRGMv2_4316_6_79 78320 79003 + 9.B.114.1.1
TC HRGMv2_4316_6 HRGMv2_4316_6_80 79180 79788 + 9.B.149.1.11
Gene ID: HRGMv2_4316_6_67
Type: TC
Location: 64845 - 66413 (+)
Gene ID: HRGMv2_4316_6_68
Type: TC
Location: 66410 - 67822 (+)
Gene ID: HRGMv2_4316_6_69
Type: CAZyme
Location: 67825 - 68943 (+)
Gene ID: HRGMv2_4316_6_70
Type: pfam
Location: 68945 - 69409 (+)
Gene ID: HRGMv2_4316_6_71
Type: pfam
Location: 69422 - 69913 (+)
Gene ID: HRGMv2_4316_6_72
Type: CAZyme
Location: 69927 - 72158 (+)
Gene ID: HRGMv2_4316_6_73
Type: CAZyme
Location: 72179 - 72910 (+)
Gene ID: HRGMv2_4316_6_74
Type: pfam
Location: 72992 - 73834 (+)
Gene ID: HRGMv2_4316_6_75
Type: TF
Location: 74200 - 75291 (+)
Gene ID: HRGMv2_4316_6_76
Type: TC
Location: 75323 - 76009 (+)
Gene ID: HRGMv2_4316_6_77
Type: pfam
Location: 75999 - 76898 (+)
Gene ID: HRGMv2_4316_6_78
Type: TC
Location: 77030 - 78214 (+)
Gene ID: HRGMv2_4316_6_79
Type: TC
Location: 78320 - 79003 (+)
Gene ID: HRGMv2_4316_6_80
Type: TC
Location: 79180 - 79788 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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