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Cluster: HRGMv2_4315_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_1 HRGMv2_4315_1_217 254981 257569 - 3.A.9.1.2
pfam HRGMv2_4315_1 HRGMv2_4315_1_218 258169 261879 + YDG | Flg_new_2 | Choline_bind_3 | Choline_bind_3
TF HRGMv2_4315_1 HRGMv2_4315_1_219 262041 264683 - 0037767
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_220 264856 266322 - GH1
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_221 266453 267658 - GH170
TC HRGMv2_4315_1 HRGMv2_4315_1_222 267667 268974 - 4.A.3.2.2
TC HRGMv2_4315_1 HRGMv2_4315_1_223 268992 269288 - 4.A.3.2.3
TC HRGMv2_4315_1 HRGMv2_4315_1_224 269301 269606 - 4.A.3.2.7
pfam HRGMv2_4315_1 HRGMv2_4315_1_225 270361 271068 + Peptidase_M54
NULL(UNKNOWN) HRGMv2_4315_1 HRGMv2_4315_1_226 271372 272079 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_227 272136 272849 - CE4
Gene ID: HRGMv2_4315_1_217
Type: TC
Location: 254981 - 257569 (-)
Gene ID: HRGMv2_4315_1_218
Type: pfam
Location: 258169 - 261879 (+)
Gene ID: HRGMv2_4315_1_219
Type: TF
Location: 262041 - 264683 (-)
Gene ID: HRGMv2_4315_1_220
Type: CAZyme
Location: 264856 - 266322 (-)
Gene ID: HRGMv2_4315_1_221
Type: CAZyme
Location: 266453 - 267658 (-)
Gene ID: HRGMv2_4315_1_222
Type: TC
Location: 267667 - 268974 (-)
Gene ID: HRGMv2_4315_1_223
Type: TC
Location: 268992 - 269288 (-)
Gene ID: HRGMv2_4315_1_224
Type: TC
Location: 269301 - 269606 (-)
Gene ID: HRGMv2_4315_1_225
Type: pfam
Location: 270361 - 271068 (+)
Gene ID: HRGMv2_4315_1_226
Type:
Location: 271372 - 272079 (-)
Gene ID: HRGMv2_4315_1_227
Type: CAZyme
Location: 272136 - 272849 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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