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Cluster: HRGMv2_4315_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_138 165438 167987 - GH3
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_139 168008 169213 - GH109
NULL(UNKNOWN) HRGMv2_4315_1 HRGMv2_4315_1_140 169235 170515 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4315_1 HRGMv2_4315_1_141 170534 171439 - 3.A.1.1.10
TC HRGMv2_4315_1 HRGMv2_4315_1_142 171433 172350 - 3.A.1.1.10
TC HRGMv2_4315_1 HRGMv2_4315_1_143 172371 174011 - 3.A.1.1.10
TF HRGMv2_4315_1 HRGMv2_4315_1_144 174462 174887 + Rrf2
TC HRGMv2_4315_1 HRGMv2_4315_1_145 175047 176378 - 2.A.66.1.37
Gene ID: HRGMv2_4315_1_138
Type: CAZyme
Location: 165438 - 167987 (-)
Gene ID: HRGMv2_4315_1_139
Type: CAZyme
Location: 168008 - 169213 (-)
Gene ID: HRGMv2_4315_1_140
Type:
Location: 169235 - 170515 (-)
Gene ID: HRGMv2_4315_1_141
Type: TC
Location: 170534 - 171439 (-)
Gene ID: HRGMv2_4315_1_142
Type: TC
Location: 171433 - 172350 (-)
Gene ID: HRGMv2_4315_1_143
Type: TC
Location: 172371 - 174011 (-)
Gene ID: HRGMv2_4315_1_144
Type: TF
Location: 174462 - 174887 (+)
Gene ID: HRGMv2_4315_1_145
Type: TC
Location: 175047 - 176378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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