dbCAN Logo

Cluster: HRGMv2_4315_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_101 116659 118026 - GH4
TC HRGMv2_4315_1 HRGMv2_4315_1_102 118054 119622 - 4.A.1.1.13
pfam HRGMv2_4315_1 HRGMv2_4315_1_103 119619 120467 - PRD | PRD | CAT_RBD
TC HRGMv2_4315_1 HRGMv2_4315_1_104 120482 120985 - 4.A.3.2.5
TF HRGMv2_4315_1 HRGMv2_4315_1_105 121668 122669 + LacI
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_106 122814 125135 - GH95
TC HRGMv2_4315_1 HRGMv2_4315_1_107 125156 126007 - 3.A.1.1.34
TC HRGMv2_4315_1 HRGMv2_4315_1_108 126009 126908 - 3.A.1.1.45
Gene ID: HRGMv2_4315_1_101
Type: CAZyme
Location: 116659 - 118026 (-)
Gene ID: HRGMv2_4315_1_102
Type: TC
Location: 118054 - 119622 (-)
Gene ID: HRGMv2_4315_1_103
Type: pfam
Location: 119619 - 120467 (-)
Gene ID: HRGMv2_4315_1_104
Type: TC
Location: 120482 - 120985 (-)
Gene ID: HRGMv2_4315_1_105
Type: TF
Location: 121668 - 122669 (+)
Gene ID: HRGMv2_4315_1_106
Type: CAZyme
Location: 122814 - 125135 (-)
Gene ID: HRGMv2_4315_1_107
Type: TC
Location: 125156 - 126007 (-)
Gene ID: HRGMv2_4315_1_108
Type: TC
Location: 126009 - 126908 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List