dbCAN Logo

Cluster: HRGMv2_4315_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_21 HRGMv2_4315_21_8 4828 5616 + 3.A.2.1.5
TC HRGMv2_4315_21 HRGMv2_4315_21_9 5639 5893 + 3.A.2.1.5
pfam HRGMv2_4315_21 HRGMv2_4315_21_10 6133 6657 + ATP-synt_B
TC HRGMv2_4315_21 HRGMv2_4315_21_11 6645 7211 + 3.A.2.1.7
TC HRGMv2_4315_21 HRGMv2_4315_21_12 7320 8705 + 3.A.2.1.5
TC HRGMv2_4315_21 HRGMv2_4315_21_13 8733 9596 + 3.A.2.1.5
TC HRGMv2_4315_21 HRGMv2_4315_21_14 9776 11170 + 3.A.2.1.5
pfam HRGMv2_4315_21 HRGMv2_4315_21_15 11194 11604 + ATP-synt_DE | ATP-synt_DE_N
TC HRGMv2_4315_21 HRGMv2_4315_21_16 11855 13609 + 1.B.52.2.1
peptidase HRGMv2_4315_21 HRGMv2_4315_21_17 13834 15009 + M38.UNW
STP HRGMv2_4315_21 HRGMv2_4315_21_18 15379 16764 + SBP_bac_1
TC HRGMv2_4315_21 HRGMv2_4315_21_19 16945 17847 + 3.A.1.1.20
TC HRGMv2_4315_21 HRGMv2_4315_21_20 17861 18754 + 3.A.1.1.18
pfam HRGMv2_4315_21 HRGMv2_4315_21_21 18773 18952 + DUF6903
CAZyme HRGMv2_4315_21 HRGMv2_4315_21_22 18994 21237 + GH95
NULL(UNKNOWN) HRGMv2_4315_21 HRGMv2_4315_21_23 21298 21750 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4315_21 HRGMv2_4315_21_24 22145 22621 + 4.A.6.1.4
TC HRGMv2_4315_21 HRGMv2_4315_21_25 22658 23491 + 4.A.6.1.7
TC HRGMv2_4315_21 HRGMv2_4315_21_26 23481 24398 + 4.A.6.1.4
NULL(UNKNOWN) HRGMv2_4315_21 HRGMv2_4315_21_27 24507 25157 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4315_21 HRGMv2_4315_21_28 25222 25650 + 4.A.6.1.1
Gene ID: HRGMv2_4315_21_8
Type: TC
Location: 4828 - 5616 (+)
Gene ID: HRGMv2_4315_21_9
Type: TC
Location: 5639 - 5893 (+)
Gene ID: HRGMv2_4315_21_10
Type: pfam
Location: 6133 - 6657 (+)
Gene ID: HRGMv2_4315_21_11
Type: TC
Location: 6645 - 7211 (+)
Gene ID: HRGMv2_4315_21_12
Type: TC
Location: 7320 - 8705 (+)
Gene ID: HRGMv2_4315_21_13
Type: TC
Location: 8733 - 9596 (+)
Gene ID: HRGMv2_4315_21_14
Type: TC
Location: 9776 - 11170 (+)
Gene ID: HRGMv2_4315_21_15
Type: pfam
Location: 11194 - 11604 (+)
Gene ID: HRGMv2_4315_21_16
Type: TC
Location: 11855 - 13609 (+)
Gene ID: HRGMv2_4315_21_17
Type: peptidase
Location: 13834 - 15009 (+)
Gene ID: HRGMv2_4315_21_18
Type: STP
Location: 15379 - 16764 (+)
Gene ID: HRGMv2_4315_21_19
Type: TC
Location: 16945 - 17847 (+)
Gene ID: HRGMv2_4315_21_20
Type: TC
Location: 17861 - 18754 (+)
Gene ID: HRGMv2_4315_21_21
Type: pfam
Location: 18773 - 18952 (+)
Gene ID: HRGMv2_4315_21_22
Type: CAZyme
Location: 18994 - 21237 (+)
Gene ID: HRGMv2_4315_21_23
Type:
Location: 21298 - 21750 (+)
Gene ID: HRGMv2_4315_21_24
Type: TC
Location: 22145 - 22621 (+)
Gene ID: HRGMv2_4315_21_25
Type: TC
Location: 22658 - 23491 (+)
Gene ID: HRGMv2_4315_21_26
Type: TC
Location: 23481 - 24398 (+)
Gene ID: HRGMv2_4315_21_27
Type:
Location: 24507 - 25157 (+)
Gene ID: HRGMv2_4315_21_28
Type: TC
Location: 25222 - 25650 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4315_21_10 vegetarian > vegan 1.33096 0.00291
HRGMv2_4315_21_15 vegetarian > omnivore 1.68537 0.00821
HRGMv2_4315_21_15 vegetarian > vegan 2.16867 0.00291

🧭 Explore Read Mapping of CGC

← Back to Cluster List