Cluster: HRGMv2_4315_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4315
- CGC Family ID: CGCFAM_01637
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4315_18 | HRGMv2_4315_18_3 | 3021 | 3899 | + | 3.A.1.1.48 |
| TC | HRGMv2_4315_18 | HRGMv2_4315_18_4 | 3912 | 4745 | + | 3.A.1.1.36 |
| CAZyme | HRGMv2_4315_18 | HRGMv2_4315_18_5 | 4764 | 6560 | + | GH2 |
| CAZyme | HRGMv2_4315_18 | HRGMv2_4315_18_6 | 6565 | 7983 | + | GH43_26 |
Gene ID: HRGMv2_4315_18_3
Type: TC
Location: 3021 - 3899 (+)
Type: TC
Location: 3021 - 3899 (+)
Gene ID: HRGMv2_4315_18_4
Type: TC
Location: 3912 - 4745 (+)
Type: TC
Location: 3912 - 4745 (+)
Gene ID: HRGMv2_4315_18_5
Type: CAZyme
Location: 4764 - 6560 (+)
Type: CAZyme
Location: 4764 - 6560 (+)
Gene ID: HRGMv2_4315_18_6
Type: CAZyme
Location: 6565 - 7983 (+)
Type: CAZyme
Location: 6565 - 7983 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp019421345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.