Cluster: HRGMv2_4315_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4315
- CGC Family ID: CGCFAM_04324
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4315_15 | HRGMv2_4315_15_48 | 47437 | 48120 | + | 2.A.88.3.1 |
| NULL(UNKNOWN) | HRGMv2_4315_15 | HRGMv2_4315_15_49 | 48257 | 48454 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4315_15 | HRGMv2_4315_15_50 | 48541 | 49479 | - | ROK |
| CAZyme | HRGMv2_4315_15 | HRGMv2_4315_15_51 | 49556 | 51733 | - | GT51 |
| TC | HRGMv2_4315_15 | HRGMv2_4315_15_52 | 51751 | 53322 | - | 1.C.105.2.8 |
Gene ID: HRGMv2_4315_15_48
Type: TC
Location: 47437 - 48120 (+)
Type: TC
Location: 47437 - 48120 (+)
Gene ID: HRGMv2_4315_15_49
Type:
Location: 48257 - 48454 (-)
Type:
Location: 48257 - 48454 (-)
Gene ID: HRGMv2_4315_15_50
Type: pfam
Location: 48541 - 49479 (-)
Type: pfam
Location: 48541 - 49479 (-)
Gene ID: HRGMv2_4315_15_51
Type: CAZyme
Location: 49556 - 51733 (-)
Type: CAZyme
Location: 49556 - 51733 (-)
Gene ID: HRGMv2_4315_15_52
Type: TC
Location: 51751 - 53322 (-)
Type: TC
Location: 51751 - 53322 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp019421345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.