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Cluster: HRGMv2_4315_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_14 HRGMv2_4315_14_52 49769 51118 + 9.B.18.1.3
CAZyme HRGMv2_4315_14 HRGMv2_4315_14_53 51127 51936 + GT2
CAZyme HRGMv2_4315_14 HRGMv2_4315_14_54 51946 52938 + GT2
TC HRGMv2_4315_14 HRGMv2_4315_14_55 53011 53784 + 3.A.1.103.1
TC HRGMv2_4315_14 HRGMv2_4315_14_56 53803 54540 + 3.A.1.103.1
CAZyme HRGMv2_4315_14 HRGMv2_4315_14_57 54546 56366 + GT2
pfam HRGMv2_4315_14 HRGMv2_4315_14_58 56350 57456 + GLF | NAD_binding_8
CAZyme HRGMv2_4315_14 HRGMv2_4315_14_59 57475 59271 + GT2
pfam HRGMv2_4315_14 HRGMv2_4315_14_60 59308 61053 + NosD | Beta_helix
CAZyme HRGMv2_4315_14 HRGMv2_4315_14_61 61079 62035 + GT2
CAZyme HRGMv2_4315_14 HRGMv2_4315_14_62 62043 64850 + CBM13 | CBM13 | GH25
Gene ID: HRGMv2_4315_14_52
Type: TC
Location: 49769 - 51118 (+)
Gene ID: HRGMv2_4315_14_53
Type: CAZyme
Location: 51127 - 51936 (+)
Gene ID: HRGMv2_4315_14_54
Type: CAZyme
Location: 51946 - 52938 (+)
Gene ID: HRGMv2_4315_14_55
Type: TC
Location: 53011 - 53784 (+)
Gene ID: HRGMv2_4315_14_56
Type: TC
Location: 53803 - 54540 (+)
Gene ID: HRGMv2_4315_14_57
Type: CAZyme
Location: 54546 - 56366 (+)
Gene ID: HRGMv2_4315_14_58
Type: pfam
Location: 56350 - 57456 (+)
Gene ID: HRGMv2_4315_14_59
Type: CAZyme
Location: 57475 - 59271 (+)
Gene ID: HRGMv2_4315_14_60
Type: pfam
Location: 59308 - 61053 (+)
Gene ID: HRGMv2_4315_14_61
Type: CAZyme
Location: 61079 - 62035 (+)
Gene ID: HRGMv2_4315_14_62
Type: CAZyme
Location: 62043 - 64850 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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