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Cluster: HRGMv2_4315_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_1 HRGMv2_4315_1_61 73164 74081 - 4.A.6.1.15
TC HRGMv2_4315_1 HRGMv2_4315_1_62 74106 74912 - 4.A.6.1.15
TC HRGMv2_4315_1 HRGMv2_4315_1_63 74939 75919 - 4.A.6.1.15
TC HRGMv2_4315_1 HRGMv2_4315_1_64 75981 76970 - 3.A.1.2.3
TC HRGMv2_4315_1 HRGMv2_4315_1_65 76989 78497 - 3.A.1.2.3
TC HRGMv2_4315_1 HRGMv2_4315_1_66 78662 79774 - 3.A.1.2.3
TC HRGMv2_4315_1 HRGMv2_4315_1_67 80101 81648 - 2.A.2.3.6
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_68 81690 84710 - GH3
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_69 84752 86746 - GH2
Gene ID: HRGMv2_4315_1_61
Type: TC
Location: 73164 - 74081 (-)
Gene ID: HRGMv2_4315_1_62
Type: TC
Location: 74106 - 74912 (-)
Gene ID: HRGMv2_4315_1_63
Type: TC
Location: 74939 - 75919 (-)
Gene ID: HRGMv2_4315_1_64
Type: TC
Location: 75981 - 76970 (-)
Gene ID: HRGMv2_4315_1_65
Type: TC
Location: 76989 - 78497 (-)
Gene ID: HRGMv2_4315_1_66
Type: TC
Location: 78662 - 79774 (-)
Gene ID: HRGMv2_4315_1_67
Type: TC
Location: 80101 - 81648 (-)
Gene ID: HRGMv2_4315_1_68
Type: CAZyme
Location: 81690 - 84710 (-)
Gene ID: HRGMv2_4315_1_69
Type: CAZyme
Location: 84752 - 86746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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