Cluster: HRGMv2_4315_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4315
- CGC Family ID: CGCFAM_08276
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4315_12 | HRGMv2_4315_12_35 | 43110 | 45290 | - | GH112 |
| TF | HRGMv2_4315_12 | HRGMv2_4315_12_36 | 45511 | 46356 | + | HTH_AraC | HTH_AraC |
| STP | HRGMv2_4315_12 | HRGMv2_4315_12_37 | 46399 | 49944 | - | Fer4 |
| TC | HRGMv2_4315_12 | HRGMv2_4315_12_38 | 50199 | 51839 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_4315_12_35
Type: CAZyme
Location: 43110 - 45290 (-)
Type: CAZyme
Location: 43110 - 45290 (-)
Gene ID: HRGMv2_4315_12_36
Type: TF
Location: 45511 - 46356 (+)
Type: TF
Location: 45511 - 46356 (+)
Gene ID: HRGMv2_4315_12_37
Type: STP
Location: 46399 - 49944 (-)
Type: STP
Location: 46399 - 49944 (-)
Gene ID: HRGMv2_4315_12_38
Type: TC
Location: 50199 - 51839 (+)
Type: TC
Location: 50199 - 51839 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp019421345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.