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Cluster: HRGMv2_4315_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4315_11 HRGMv2_4315_11_28 27636 30188 + GH98
TC HRGMv2_4315_11 HRGMv2_4315_11_29 30336 31412 - 2.A.98.1.4
pfam HRGMv2_4315_11 HRGMv2_4315_11_30 31616 32824 + Metalloenzyme
pfam HRGMv2_4315_11 HRGMv2_4315_11_31 33175 33486 + Thioredoxin | AhpC-TSA | Thioredoxin_2 | TraF | Thioredoxin_9
TC HRGMv2_4315_11 HRGMv2_4315_11_32 33589 34956 + 5.A.1.2.7
NULL(UNKNOWN) HRGMv2_4315_11 HRGMv2_4315_11_33 35066 35485 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4315_11 HRGMv2_4315_11_34 35494 36381 + 2.A.115.1.1
TF HRGMv2_4315_11 HRGMv2_4315_11_35 36378 37283 + HTH_1
TC HRGMv2_4315_11 HRGMv2_4315_11_36 37407 38462 + 3.A.1.24.2
TC HRGMv2_4315_11 HRGMv2_4315_11_37 38449 39108 + 3.A.1.24.5
TC HRGMv2_4315_11 HRGMv2_4315_11_38 39198 40106 + 3.A.1.24.5
pfam HRGMv2_4315_11 HRGMv2_4315_11_39 40129 40791 + CxxCxxCC
pfam HRGMv2_4315_11 HRGMv2_4315_11_40 41010 41867 - DegV
TC HRGMv2_4315_11 HRGMv2_4315_11_41 42041 42403 + 1.E.14.1.15
TC HRGMv2_4315_11 HRGMv2_4315_11_42 42396 43088 + 2.A.122.1.4
CAZyme HRGMv2_4315_11 HRGMv2_4315_11_43 43147 43956 + CBM50
Gene ID: HRGMv2_4315_11_28
Type: CAZyme
Location: 27636 - 30188 (+)
Gene ID: HRGMv2_4315_11_29
Type: TC
Location: 30336 - 31412 (-)
Gene ID: HRGMv2_4315_11_30
Type: pfam
Location: 31616 - 32824 (+)
Gene ID: HRGMv2_4315_11_31
Type: pfam
Location: 33175 - 33486 (+)
Gene ID: HRGMv2_4315_11_32
Type: TC
Location: 33589 - 34956 (+)
Gene ID: HRGMv2_4315_11_33
Type:
Location: 35066 - 35485 (+)
Gene ID: HRGMv2_4315_11_34
Type: TC
Location: 35494 - 36381 (+)
Gene ID: HRGMv2_4315_11_35
Type: TF
Location: 36378 - 37283 (+)
Gene ID: HRGMv2_4315_11_36
Type: TC
Location: 37407 - 38462 (+)
Gene ID: HRGMv2_4315_11_37
Type: TC
Location: 38449 - 39108 (+)
Gene ID: HRGMv2_4315_11_38
Type: TC
Location: 39198 - 40106 (+)
Gene ID: HRGMv2_4315_11_39
Type: pfam
Location: 40129 - 40791 (+)
Gene ID: HRGMv2_4315_11_40
Type: pfam
Location: 41010 - 41867 (-)
Gene ID: HRGMv2_4315_11_41
Type: TC
Location: 42041 - 42403 (+)
Gene ID: HRGMv2_4315_11_42
Type: TC
Location: 42396 - 43088 (+)
Gene ID: HRGMv2_4315_11_43
Type: CAZyme
Location: 43147 - 43956 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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