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Cluster: HRGMv2_4315_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_10 HRGMv2_4315_10_74 74147 75094 + 3.A.1.1.42
TC HRGMv2_4315_10 HRGMv2_4315_10_75 75091 75927 + 3.A.1.1.27
TC HRGMv2_4315_10 HRGMv2_4315_10_76 75965 77473 + 3.A.1.1.21
pfam HRGMv2_4315_10 HRGMv2_4315_10_77 77750 78772 + Asparaginase | Asparaginase_C
TC HRGMv2_4315_10 HRGMv2_4315_10_78 78795 80201 + 2.A.25.1.5
TC HRGMv2_4315_10 HRGMv2_4315_10_79 80205 81809 + 2.A.1.15.16
TC HRGMv2_4315_10 HRGMv2_4315_10_80 82235 82771 + 3.A.1.25.5
TC HRGMv2_4315_10 HRGMv2_4315_10_81 82782 84065 - 2.A.49.9.2
TF HRGMv2_4315_10 HRGMv2_4315_10_82 84242 84460 + HTH_3
pfam HRGMv2_4315_10 HRGMv2_4315_10_83 84450 85241 + DUF3169
TC HRGMv2_4315_10 HRGMv2_4315_10_84 85525 86937 + 3.A.1.1.45
TC HRGMv2_4315_10 HRGMv2_4315_10_85 87027 87884 + 3.A.1.1.45
TC HRGMv2_4315_10 HRGMv2_4315_10_86 87884 88786 + 3.A.1.1.45
TF HRGMv2_4315_10 HRGMv2_4315_10_87 88791 89810 + LacI
CAZyme HRGMv2_4315_10 HRGMv2_4315_10_88 89836 91347 + GH77
Gene ID: HRGMv2_4315_10_74
Type: TC
Location: 74147 - 75094 (+)
Gene ID: HRGMv2_4315_10_75
Type: TC
Location: 75091 - 75927 (+)
Gene ID: HRGMv2_4315_10_76
Type: TC
Location: 75965 - 77473 (+)
Gene ID: HRGMv2_4315_10_77
Type: pfam
Location: 77750 - 78772 (+)
Gene ID: HRGMv2_4315_10_78
Type: TC
Location: 78795 - 80201 (+)
Gene ID: HRGMv2_4315_10_79
Type: TC
Location: 80205 - 81809 (+)
Gene ID: HRGMv2_4315_10_80
Type: TC
Location: 82235 - 82771 (+)
Gene ID: HRGMv2_4315_10_81
Type: TC
Location: 82782 - 84065 (-)
Gene ID: HRGMv2_4315_10_82
Type: TF
Location: 84242 - 84460 (+)
Gene ID: HRGMv2_4315_10_83
Type: pfam
Location: 84450 - 85241 (+)
Gene ID: HRGMv2_4315_10_84
Type: TC
Location: 85525 - 86937 (+)
Gene ID: HRGMv2_4315_10_85
Type: TC
Location: 87027 - 87884 (+)
Gene ID: HRGMv2_4315_10_86
Type: TC
Location: 87884 - 88786 (+)
Gene ID: HRGMv2_4315_10_87
Type: TF
Location: 88791 - 89810 (+)
Gene ID: HRGMv2_4315_10_88
Type: CAZyme
Location: 89836 - 91347 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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