dbCAN Logo

Cluster: HRGMv2_4315_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4315_8 HRGMv2_4315_8_59 59474 61237 + GH18
pfam HRGMv2_4315_8 HRGMv2_4315_8_60 61315 62010 + Amidase_3
pfam HRGMv2_4315_8 HRGMv2_4315_8_61 62005 65103 - DUF6240 | DUF6240
CAZyme HRGMv2_4315_8 HRGMv2_4315_8_62 65288 67186 - CBM48 | GH13_9
STP HRGMv2_4315_8 HRGMv2_4315_8_63 67207 69750 - T2SSE | TPR_2
TF HRGMv2_4315_8 HRGMv2_4315_8_64 69999 70814 + HTH_6
CAZyme HRGMv2_4315_8 HRGMv2_4315_8_65 71136 72485 + GH29
TC HRGMv2_4315_8 HRGMv2_4315_8_66 72491 73378 + 4.A.6.1.13
TC HRGMv2_4315_8 HRGMv2_4315_8_67 73400 74203 + 4.A.6.1.13
TC HRGMv2_4315_8 HRGMv2_4315_8_68 74184 74996 + 4.A.6.1.13
Gene ID: HRGMv2_4315_8_59
Type: CAZyme
Location: 59474 - 61237 (+)
Gene ID: HRGMv2_4315_8_60
Type: pfam
Location: 61315 - 62010 (+)
Gene ID: HRGMv2_4315_8_61
Type: pfam
Location: 62005 - 65103 (-)
Gene ID: HRGMv2_4315_8_62
Type: CAZyme
Location: 65288 - 67186 (-)
Gene ID: HRGMv2_4315_8_63
Type: STP
Location: 67207 - 69750 (-)
Gene ID: HRGMv2_4315_8_64
Type: TF
Location: 69999 - 70814 (+)
Gene ID: HRGMv2_4315_8_65
Type: CAZyme
Location: 71136 - 72485 (+)
Gene ID: HRGMv2_4315_8_66
Type: TC
Location: 72491 - 73378 (+)
Gene ID: HRGMv2_4315_8_67
Type: TC
Location: 73400 - 74203 (+)
Gene ID: HRGMv2_4315_8_68
Type: TC
Location: 74184 - 74996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List