Cluster: HRGMv2_4315_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4315
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4315_8 | HRGMv2_4315_8_12 | 12619 | 13239 | - | GH25 |
| pfam | HRGMv2_4315_8 | HRGMv2_4315_8_13 | 13401 | 13772 | - | DUF2752 |
| pfam | HRGMv2_4315_8 | HRGMv2_4315_8_14 | 13777 | 14115 | - | DUF4234 | DUF4234 |
| TC | HRGMv2_4315_8 | HRGMv2_4315_8_15 | 14215 | 16179 | - | 3.A.1.134.10 |
| pfam | HRGMv2_4315_8 | HRGMv2_4315_8_16 | 16189 | 18405 | - | FtsX |
| TC | HRGMv2_4315_8 | HRGMv2_4315_8_17 | 18380 | 19162 | - | 3.A.1.134.12 |
Gene ID: HRGMv2_4315_8_12
Type: CAZyme
Location: 12619 - 13239 (-)
Type: CAZyme
Location: 12619 - 13239 (-)
Gene ID: HRGMv2_4315_8_13
Type: pfam
Location: 13401 - 13772 (-)
Type: pfam
Location: 13401 - 13772 (-)
Gene ID: HRGMv2_4315_8_14
Type: pfam
Location: 13777 - 14115 (-)
Type: pfam
Location: 13777 - 14115 (-)
Gene ID: HRGMv2_4315_8_15
Type: TC
Location: 14215 - 16179 (-)
Type: TC
Location: 14215 - 16179 (-)
Gene ID: HRGMv2_4315_8_16
Type: pfam
Location: 16189 - 18405 (-)
Type: pfam
Location: 16189 - 18405 (-)
Gene ID: HRGMv2_4315_8_17
Type: TC
Location: 18380 - 19162 (-)
Type: TC
Location: 18380 - 19162 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp019421345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.