Cluster: HRGMv2_4315_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4315
- CGC Family ID: CGCFAM_08589
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4315_7 | HRGMv2_4315_7_69 | 80128 | 81579 | + | GT5 |
| pfam | HRGMv2_4315_7 | HRGMv2_4315_7_70 | 81593 | 82495 | - | DUF5688 |
| pfam | HRGMv2_4315_7 | HRGMv2_4315_7_71 | 82907 | 84154 | + | Bmp |
| TC | HRGMv2_4315_7 | HRGMv2_4315_7_72 | 84312 | 85853 | + | 3.A.1.2.17 |
| TC | HRGMv2_4315_7 | HRGMv2_4315_7_73 | 85850 | 86971 | + | 3.A.1.2.12 |
| TC | HRGMv2_4315_7 | HRGMv2_4315_7_74 | 86971 | 87912 | + | 3.A.1.2.17 |
Gene ID: HRGMv2_4315_7_69
Type: CAZyme
Location: 80128 - 81579 (+)
Type: CAZyme
Location: 80128 - 81579 (+)
Gene ID: HRGMv2_4315_7_70
Type: pfam
Location: 81593 - 82495 (-)
Type: pfam
Location: 81593 - 82495 (-)
Gene ID: HRGMv2_4315_7_71
Type: pfam
Location: 82907 - 84154 (+)
Type: pfam
Location: 82907 - 84154 (+)
Gene ID: HRGMv2_4315_7_72
Type: TC
Location: 84312 - 85853 (+)
Type: TC
Location: 84312 - 85853 (+)
Gene ID: HRGMv2_4315_7_73
Type: TC
Location: 85850 - 86971 (+)
Type: TC
Location: 85850 - 86971 (+)
Gene ID: HRGMv2_4315_7_74
Type: TC
Location: 86971 - 87912 (+)
Type: TC
Location: 86971 - 87912 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp019421345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.