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Cluster: HRGMv2_4315_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_6 HRGMv2_4315_6_73 69931 70812 + 3.A.1.148.3
TC HRGMv2_4315_6 HRGMv2_4315_6_74 71032 72942 + 4.A.1.2.11
CAZyme HRGMv2_4315_6 HRGMv2_4315_6_75 73020 74435 + GH1
CAZyme HRGMv2_4315_6 HRGMv2_4315_6_76 74636 75586 + GT108
NULL(UNKNOWN) HRGMv2_4315_6 HRGMv2_4315_6_77 75621 77024 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4315_6 HRGMv2_4315_6_78 77098 78000 + 3.A.1.1.28
TC HRGMv2_4315_6 HRGMv2_4315_6_79 78014 78841 + 3.A.1.1.46
CAZyme HRGMv2_4315_6 HRGMv2_4315_6_80 78864 79946 + GH130_4
TF HRGMv2_4315_6 HRGMv2_4315_6_81 80032 81057 + LacI
CAZyme HRGMv2_4315_6 HRGMv2_4315_6_82 81093 82724 + GH13_23
CAZyme HRGMv2_4315_6 HRGMv2_4315_6_83 82916 84157 + CBM13 | GH16_3
CAZyme HRGMv2_4315_6 HRGMv2_4315_6_84 84185 85456 + GH177
CAZyme HRGMv2_4315_6 HRGMv2_4315_6_85 85479 87116 + GH123
Gene ID: HRGMv2_4315_6_73
Type: TC
Location: 69931 - 70812 (+)
Gene ID: HRGMv2_4315_6_74
Type: TC
Location: 71032 - 72942 (+)
Gene ID: HRGMv2_4315_6_75
Type: CAZyme
Location: 73020 - 74435 (+)
Gene ID: HRGMv2_4315_6_76
Type: CAZyme
Location: 74636 - 75586 (+)
Gene ID: HRGMv2_4315_6_77
Type:
Location: 75621 - 77024 (+)
Gene ID: HRGMv2_4315_6_78
Type: TC
Location: 77098 - 78000 (+)
Gene ID: HRGMv2_4315_6_79
Type: TC
Location: 78014 - 78841 (+)
Gene ID: HRGMv2_4315_6_80
Type: CAZyme
Location: 78864 - 79946 (+)
Gene ID: HRGMv2_4315_6_81
Type: TF
Location: 80032 - 81057 (+)
Gene ID: HRGMv2_4315_6_82
Type: CAZyme
Location: 81093 - 82724 (+)
Gene ID: HRGMv2_4315_6_83
Type: CAZyme
Location: 82916 - 84157 (+)
Gene ID: HRGMv2_4315_6_84
Type: CAZyme
Location: 84185 - 85456 (+)
Gene ID: HRGMv2_4315_6_85
Type: CAZyme
Location: 85479 - 87116 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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