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Cluster: HRGMv2_4315_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_5 HRGMv2_4315_5_52 65914 67890 - 8.A.59.2.1
TC HRGMv2_4315_5 HRGMv2_4315_5_53 68087 69526 - 3.A.1.1.41
TC HRGMv2_4315_5 HRGMv2_4315_5_54 69714 70622 + 3.A.1.1.30
TC HRGMv2_4315_5 HRGMv2_4315_5_55 70641 71996 + 3.A.1.1.11
CAZyme HRGMv2_4315_5 HRGMv2_4315_5_56 72006 73826 + GH110
pfam HRGMv2_4315_5 HRGMv2_4315_5_57 73853 74539 + DNA_alkylation
TF HRGMv2_4315_5 HRGMv2_4315_5_58 74571 74930 - HTH_3
TC HRGMv2_4315_5 HRGMv2_4315_5_59 75112 76128 + 9.A.11.1.1
Gene ID: HRGMv2_4315_5_52
Type: TC
Location: 65914 - 67890 (-)
Gene ID: HRGMv2_4315_5_53
Type: TC
Location: 68087 - 69526 (-)
Gene ID: HRGMv2_4315_5_54
Type: TC
Location: 69714 - 70622 (+)
Gene ID: HRGMv2_4315_5_55
Type: TC
Location: 70641 - 71996 (+)
Gene ID: HRGMv2_4315_5_56
Type: CAZyme
Location: 72006 - 73826 (+)
Gene ID: HRGMv2_4315_5_57
Type: pfam
Location: 73853 - 74539 (+)
Gene ID: HRGMv2_4315_5_58
Type: TF
Location: 74571 - 74930 (-)
Gene ID: HRGMv2_4315_5_59
Type: TC
Location: 75112 - 76128 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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