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Cluster: HRGMv2_4315_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4315_5 HRGMv2_4315_5_37 47453 49939 + GT2
NULL(UNKNOWN) HRGMv2_4315_5 HRGMv2_4315_5_38 49971 50168 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4315_5 HRGMv2_4315_5_39 50171 52117 + GT2
CAZyme HRGMv2_4315_5 HRGMv2_4315_5_40 52130 53095 + GT2
TC HRGMv2_4315_5 HRGMv2_4315_5_41 53214 54632 + 9.B.18.1.1
pfam HRGMv2_4315_5 HRGMv2_4315_5_42 54643 55755 + LytR_cpsA_psr
CAZyme HRGMv2_4315_5 HRGMv2_4315_5_43 55755 56717 + GT2
Gene ID: HRGMv2_4315_5_37
Type: CAZyme
Location: 47453 - 49939 (+)
Gene ID: HRGMv2_4315_5_38
Type:
Location: 49971 - 50168 (+)
Gene ID: HRGMv2_4315_5_39
Type: CAZyme
Location: 50171 - 52117 (+)
Gene ID: HRGMv2_4315_5_40
Type: CAZyme
Location: 52130 - 53095 (+)
Gene ID: HRGMv2_4315_5_41
Type: TC
Location: 53214 - 54632 (+)
Gene ID: HRGMv2_4315_5_42
Type: pfam
Location: 54643 - 55755 (+)
Gene ID: HRGMv2_4315_5_43
Type: CAZyme
Location: 55755 - 56717 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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