dbCAN Logo

Cluster: HRGMv2_4315_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_3 HRGMv2_4315_3_150 140632 141363 - 3.A.1.124.6
TC HRGMv2_4315_3 HRGMv2_4315_3_151 141360 142088 - 3.A.1.124.2
TC HRGMv2_4315_3 HRGMv2_4315_3_152 142092 142793 - 3.A.1.124.6
STP HRGMv2_4315_3 HRGMv2_4315_3_153 143039 144322 + Aminotran_1_2
CAZyme HRGMv2_4315_3 HRGMv2_4315_3_154 144343 145797 + GT5
peptidase HRGMv2_4315_3 HRGMv2_4315_3_155 145890 146573 + S14.UPW
pfam HRGMv2_4315_3 HRGMv2_4315_3_156 146673 147551 + BacA
TC HRGMv2_4315_3 HRGMv2_4315_3_157 147570 150281 + 3.A.12.1.1
Gene ID: HRGMv2_4315_3_150
Type: TC
Location: 140632 - 141363 (-)
Gene ID: HRGMv2_4315_3_151
Type: TC
Location: 141360 - 142088 (-)
Gene ID: HRGMv2_4315_3_152
Type: TC
Location: 142092 - 142793 (-)
Gene ID: HRGMv2_4315_3_153
Type: STP
Location: 143039 - 144322 (+)
Gene ID: HRGMv2_4315_3_154
Type: CAZyme
Location: 144343 - 145797 (+)
Gene ID: HRGMv2_4315_3_155
Type: peptidase
Location: 145890 - 146573 (+)
Gene ID: HRGMv2_4315_3_156
Type: pfam
Location: 146673 - 147551 (+)
Gene ID: HRGMv2_4315_3_157
Type: TC
Location: 147570 - 150281 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List