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Cluster: HRGMv2_4315_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_2 HRGMv2_4315_2_42 43138 44154 - 3.A.1.2.11
TC HRGMv2_4315_2 HRGMv2_4315_2_43 44168 45712 - 3.A.1.2.13
CAZyme HRGMv2_4315_2 HRGMv2_4315_2_44 45958 47265 - GH29
pfam HRGMv2_4315_2 HRGMv2_4315_2_45 47277 48539 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC HRGMv2_4315_2 HRGMv2_4315_2_46 48570 49418 - 3.A.1.1.47
TC HRGMv2_4315_2 HRGMv2_4315_2_47 49415 50374 - 3.A.1.1.47
TC HRGMv2_4315_2 HRGMv2_4315_2_48 50532 51878 - 3.A.1.1.47
Gene ID: HRGMv2_4315_2_42
Type: TC
Location: 43138 - 44154 (-)
Gene ID: HRGMv2_4315_2_43
Type: TC
Location: 44168 - 45712 (-)
Gene ID: HRGMv2_4315_2_44
Type: CAZyme
Location: 45958 - 47265 (-)
Gene ID: HRGMv2_4315_2_45
Type: pfam
Location: 47277 - 48539 (-)
Gene ID: HRGMv2_4315_2_46
Type: TC
Location: 48570 - 49418 (-)
Gene ID: HRGMv2_4315_2_47
Type: TC
Location: 49415 - 50374 (-)
Gene ID: HRGMv2_4315_2_48
Type: TC
Location: 50532 - 51878 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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