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Cluster: HRGMv2_4315_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4315_1 HRGMv2_4315_1_306 360036 361379 + 2.A.38.4.1
TC HRGMv2_4315_1 HRGMv2_4315_1_307 361407 362057 + 2.A.38.4.6
TC HRGMv2_4315_1 HRGMv2_4315_1_308 362115 362756 - 2.A.115.2.14
TC HRGMv2_4315_1 HRGMv2_4315_1_309 362779 363489 - 3.A.1.4.10
TC HRGMv2_4315_1 HRGMv2_4315_1_310 363703 364464 - 3.A.1.4.10
TC HRGMv2_4315_1 HRGMv2_4315_1_311 364467 365537 - 3.A.1.4.8
TC HRGMv2_4315_1 HRGMv2_4315_1_312 365556 366437 - 3.A.1.4.10
TC HRGMv2_4315_1 HRGMv2_4315_1_313 366462 367625 - 3.A.1.4.10
NULL(UNKNOWN) HRGMv2_4315_1 HRGMv2_4315_1_314 367903 368586 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4315_1 HRGMv2_4315_1_315 368805 369020 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4315_1 HRGMv2_4315_1_316 369038 370042 - 3.A.1.5.20
TC HRGMv2_4315_1 HRGMv2_4315_1_317 370026 371027 - 3.A.1.5.20
TC HRGMv2_4315_1 HRGMv2_4315_1_318 371037 372842 - 3.A.1.5.20
TC HRGMv2_4315_1 HRGMv2_4315_1_319 372851 373834 - 3.A.1.5.20
STP HRGMv2_4315_1 HRGMv2_4315_1_320 374013 375926 - SBP_bac_5
NULL(UNKNOWN) HRGMv2_4315_1 HRGMv2_4315_1_321 376444 376755 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_322 376761 378470 - GH13_18
NULL(UNKNOWN) HRGMv2_4315_1 HRGMv2_4315_1_323 378460 379554 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4315_1 HRGMv2_4315_1_324 379554 381224 - GH13_31
TC HRGMv2_4315_1 HRGMv2_4315_1_325 381249 381617 - 3.A.1.1.45
Gene ID: HRGMv2_4315_1_306
Type: TC
Location: 360036 - 361379 (+)
Gene ID: HRGMv2_4315_1_307
Type: TC
Location: 361407 - 362057 (+)
Gene ID: HRGMv2_4315_1_308
Type: TC
Location: 362115 - 362756 (-)
Gene ID: HRGMv2_4315_1_309
Type: TC
Location: 362779 - 363489 (-)
Gene ID: HRGMv2_4315_1_310
Type: TC
Location: 363703 - 364464 (-)
Gene ID: HRGMv2_4315_1_311
Type: TC
Location: 364467 - 365537 (-)
Gene ID: HRGMv2_4315_1_312
Type: TC
Location: 365556 - 366437 (-)
Gene ID: HRGMv2_4315_1_313
Type: TC
Location: 366462 - 367625 (-)
Gene ID: HRGMv2_4315_1_314
Type:
Location: 367903 - 368586 (-)
Gene ID: HRGMv2_4315_1_315
Type:
Location: 368805 - 369020 (-)
Gene ID: HRGMv2_4315_1_316
Type: TC
Location: 369038 - 370042 (-)
Gene ID: HRGMv2_4315_1_317
Type: TC
Location: 370026 - 371027 (-)
Gene ID: HRGMv2_4315_1_318
Type: TC
Location: 371037 - 372842 (-)
Gene ID: HRGMv2_4315_1_319
Type: TC
Location: 372851 - 373834 (-)
Gene ID: HRGMv2_4315_1_320
Type: STP
Location: 374013 - 375926 (-)
Gene ID: HRGMv2_4315_1_321
Type:
Location: 376444 - 376755 (+)
Gene ID: HRGMv2_4315_1_322
Type: CAZyme
Location: 376761 - 378470 (-)
Gene ID: HRGMv2_4315_1_323
Type:
Location: 378460 - 379554 (-)
Gene ID: HRGMv2_4315_1_324
Type: CAZyme
Location: 379554 - 381224 (-)
Gene ID: HRGMv2_4315_1_325
Type: TC
Location: 381249 - 381617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4315_1_309 vegetarian > omnivore 1.28143 0.00821
HRGMv2_4315_1_309 vegetarian > vegan 1.47226 0.00291

🧭 Explore Read Mapping of CGC

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