Cluster: HRGMv2_4315_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4315
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4315_1 | HRGMv2_4315_1_231 | 276088 | 277101 | - | GT2 |
| STP | HRGMv2_4315_1 | HRGMv2_4315_1_232 | 277541 | 278686 | - | HhH-GPD |
| sulfatase | HRGMv2_4315_1 | HRGMv2_4315_1_233 | 278880 | 279683 | + | S1_8 |
| CAZyme | HRGMv2_4315_1 | HRGMv2_4315_1_234 | 279828 | 281147 | - | GH13_20 |
| pfam | HRGMv2_4315_1 | HRGMv2_4315_1_235 | 281158 | 281976 | - | NAD_binding_2 | F420_oxidored | Rossmann-like | P5CR_dimer |
| pfam | HRGMv2_4315_1 | HRGMv2_4315_1_236 | 282066 | 284141 | - | Spore_permease |
| TC | HRGMv2_4315_1 | HRGMv2_4315_1_237 | 284202 | 285707 | - | 9.A.11.1.2 |
Gene ID: HRGMv2_4315_1_231
Type: CAZyme
Location: 276088 - 277101 (-)
Type: CAZyme
Location: 276088 - 277101 (-)
Gene ID: HRGMv2_4315_1_232
Type: STP
Location: 277541 - 278686 (-)
Type: STP
Location: 277541 - 278686 (-)
Gene ID: HRGMv2_4315_1_233
Type: sulfatase
Location: 278880 - 279683 (+)
Type: sulfatase
Location: 278880 - 279683 (+)
Gene ID: HRGMv2_4315_1_234
Type: CAZyme
Location: 279828 - 281147 (-)
Type: CAZyme
Location: 279828 - 281147 (-)
Gene ID: HRGMv2_4315_1_235
Type: pfam
Location: 281158 - 281976 (-)
Type: pfam
Location: 281158 - 281976 (-)
Gene ID: HRGMv2_4315_1_236
Type: pfam
Location: 282066 - 284141 (-)
Type: pfam
Location: 282066 - 284141 (-)
Gene ID: HRGMv2_4315_1_237
Type: TC
Location: 284202 - 285707 (-)
Type: TC
Location: 284202 - 285707 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia sp019421345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.