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Cluster: HRGMv2_4314_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4314_3 HRGMv2_4314_3_248 279827 282127 - CBM46 | GH5_4
peptidase HRGMv2_4314_3 HRGMv2_4314_3_249 282391 282912 - A08.UPW
CAZyme HRGMv2_4314_3 HRGMv2_4314_3_250 282900 283913 - GT2
TC HRGMv2_4314_3 HRGMv2_4314_3_251 284106 285704 - 3.B.1.1.5
TF HRGMv2_4314_3 HRGMv2_4314_3_252 285857 286585 - Trans_reg_C
STP HRGMv2_4314_3 HRGMv2_4314_3_253 286719 289400 - HATPase_c | HisKA
TC HRGMv2_4314_3 HRGMv2_4314_3_254 289489 290094 - 3.A.3.7.2
TC HRGMv2_4314_3 HRGMv2_4314_3_255 290279 292324 - 3.A.3.7.1
TC HRGMv2_4314_3 HRGMv2_4314_3_256 292439 294190 - 3.A.3.7.1
Gene ID: HRGMv2_4314_3_248
Type: CAZyme
Location: 279827 - 282127 (-)
Gene ID: HRGMv2_4314_3_249
Type: peptidase
Location: 282391 - 282912 (-)
Gene ID: HRGMv2_4314_3_250
Type: CAZyme
Location: 282900 - 283913 (-)
Gene ID: HRGMv2_4314_3_251
Type: TC
Location: 284106 - 285704 (-)
Gene ID: HRGMv2_4314_3_252
Type: TF
Location: 285857 - 286585 (-)
Gene ID: HRGMv2_4314_3_253
Type: STP
Location: 286719 - 289400 (-)
Gene ID: HRGMv2_4314_3_254
Type: TC
Location: 289489 - 290094 (-)
Gene ID: HRGMv2_4314_3_255
Type: TC
Location: 290279 - 292324 (-)
Gene ID: HRGMv2_4314_3_256
Type: TC
Location: 292439 - 294190 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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