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Cluster: HRGMv2_4314_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_35 HRGMv2_4314_35_15 13242 15605 - 3.A.1.122.13
pfam HRGMv2_4314_35 HRGMv2_4314_35_16 15886 17721 - pAdhesive_15
CAZyme HRGMv2_4314_35 HRGMv2_4314_35_17 17868 19118 - CBM13 | GH16_3
CAZyme HRGMv2_4314_35 HRGMv2_4314_35_18 19231 21069 - GH110
TC HRGMv2_4314_35 HRGMv2_4314_35_19 21474 23411 + 8.A.59.2.1
CAZyme HRGMv2_4314_35 HRGMv2_4314_35_20 23431 25077 - GH123
CAZyme HRGMv2_4314_35 HRGMv2_4314_35_21 25099 26367 - GH177
TC HRGMv2_4314_35 HRGMv2_4314_35_22 26472 27827 - 3.A.1.1.11
TC HRGMv2_4314_35 HRGMv2_4314_35_23 27839 28744 - 3.A.1.1.30
TC HRGMv2_4314_35 HRGMv2_4314_35_24 28971 30335 + 3.A.1.1.41
Gene ID: HRGMv2_4314_35_15
Type: TC
Location: 13242 - 15605 (-)
Gene ID: HRGMv2_4314_35_16
Type: pfam
Location: 15886 - 17721 (-)
Gene ID: HRGMv2_4314_35_17
Type: CAZyme
Location: 17868 - 19118 (-)
Gene ID: HRGMv2_4314_35_18
Type: CAZyme
Location: 19231 - 21069 (-)
Gene ID: HRGMv2_4314_35_19
Type: TC
Location: 21474 - 23411 (+)
Gene ID: HRGMv2_4314_35_20
Type: CAZyme
Location: 23431 - 25077 (-)
Gene ID: HRGMv2_4314_35_21
Type: CAZyme
Location: 25099 - 26367 (-)
Gene ID: HRGMv2_4314_35_22
Type: TC
Location: 26472 - 27827 (-)
Gene ID: HRGMv2_4314_35_23
Type: TC
Location: 27839 - 28744 (-)
Gene ID: HRGMv2_4314_35_24
Type: TC
Location: 28971 - 30335 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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