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Cluster: HRGMv2_4314_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4314_28 HRGMv2_4314_28_46 47372 49465 + CBM77 | PL1
pfam HRGMv2_4314_28 HRGMv2_4314_28_47 50264 50935 + Rubrerythrin | RUBY_RBDX | RUBY_RBDX
pfam HRGMv2_4314_28 HRGMv2_4314_28_48 51125 51826 + DUF969
TC HRGMv2_4314_28 HRGMv2_4314_28_49 51845 52813 + 9.B.211.1.2
peptidase HRGMv2_4314_28 HRGMv2_4314_28_50 52890 53534 + C15.001
TC HRGMv2_4314_28 HRGMv2_4314_28_51 53713 54342 - 3.A.1.122.3
Gene ID: HRGMv2_4314_28_46
Type: CAZyme
Location: 47372 - 49465 (+)
Gene ID: HRGMv2_4314_28_47
Type: pfam
Location: 50264 - 50935 (+)
Gene ID: HRGMv2_4314_28_48
Type: pfam
Location: 51125 - 51826 (+)
Gene ID: HRGMv2_4314_28_49
Type: TC
Location: 51845 - 52813 (+)
Gene ID: HRGMv2_4314_28_50
Type: peptidase
Location: 52890 - 53534 (+)
Gene ID: HRGMv2_4314_28_51
Type: TC
Location: 53713 - 54342 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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