Cluster: HRGMv2_4314_CGC43
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4314
- CGC Family ID: CGCFAM_10580
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4314_21 | HRGMv2_4314_21_30 | 38082 | 38756 | - | 9.B.28.1.2 |
| TC | HRGMv2_4314_21 | HRGMv2_4314_21_31 | 39172 | 40128 | + | 3.A.1.1.29 |
| TC | HRGMv2_4314_21 | HRGMv2_4314_21_32 | 40147 | 41073 | + | 3.A.1.1.29 |
| STP | HRGMv2_4314_21 | HRGMv2_4314_21_33 | 41214 | 43031 | + | SBP_bac_1 |
| TC | HRGMv2_4314_21 | HRGMv2_4314_21_34 | 43274 | 45472 | + | 1.B.52.2.1 |
| CAZyme | HRGMv2_4314_21 | HRGMv2_4314_21_35 | 45507 | 46973 | + | GH29 |
| TF | HRGMv2_4314_21 | HRGMv2_4314_21_36 | 47424 | 49007 | - | HTH_AraC |
| TC | HRGMv2_4314_21 | HRGMv2_4314_21_37 | 49008 | 50813 | - | 8.A.59.2.1 |
| CAZyme | HRGMv2_4314_21 | HRGMv2_4314_21_38 | 51222 | 53426 | + | GH3 |
| pfam | HRGMv2_4314_21 | HRGMv2_4314_21_39 | 53698 | 54825 | + | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | PurK_C | RS_preATP-grasp-like |
| pfam | HRGMv2_4314_21 | HRGMv2_4314_21_40 | 54856 | 55365 | + | AIRC |
| CAZyme | HRGMv2_4314_21 | HRGMv2_4314_21_41 | 55508 | 56791 | - | GH27 |
Gene ID: HRGMv2_4314_21_30
Type: TC
Location: 38082 - 38756 (-)
Type: TC
Location: 38082 - 38756 (-)
Gene ID: HRGMv2_4314_21_31
Type: TC
Location: 39172 - 40128 (+)
Type: TC
Location: 39172 - 40128 (+)
Gene ID: HRGMv2_4314_21_32
Type: TC
Location: 40147 - 41073 (+)
Type: TC
Location: 40147 - 41073 (+)
Gene ID: HRGMv2_4314_21_33
Type: STP
Location: 41214 - 43031 (+)
Type: STP
Location: 41214 - 43031 (+)
Gene ID: HRGMv2_4314_21_34
Type: TC
Location: 43274 - 45472 (+)
Type: TC
Location: 43274 - 45472 (+)
Gene ID: HRGMv2_4314_21_35
Type: CAZyme
Location: 45507 - 46973 (+)
Type: CAZyme
Location: 45507 - 46973 (+)
Gene ID: HRGMv2_4314_21_36
Type: TF
Location: 47424 - 49007 (-)
Type: TF
Location: 47424 - 49007 (-)
Gene ID: HRGMv2_4314_21_37
Type: TC
Location: 49008 - 50813 (-)
Type: TC
Location: 49008 - 50813 (-)
Gene ID: HRGMv2_4314_21_38
Type: CAZyme
Location: 51222 - 53426 (+)
Type: CAZyme
Location: 51222 - 53426 (+)
Gene ID: HRGMv2_4314_21_39
Type: pfam
Location: 53698 - 54825 (+)
Type: pfam
Location: 53698 - 54825 (+)
Gene ID: HRGMv2_4314_21_40
Type: pfam
Location: 54856 - 55365 (+)
Type: pfam
Location: 54856 - 55365 (+)
Gene ID: HRGMv2_4314_21_41
Type: CAZyme
Location: 55508 - 56791 (-)
Type: CAZyme
Location: 55508 - 56791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerosporobacter
Species
Anaerosporobacter sp019421365
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.