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Cluster: HRGMv2_4314_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_19 HRGMv2_4314_19_3 2582 3640 + 3.A.1.1.10
TC HRGMv2_4314_19 HRGMv2_4314_19_4 3652 4572 + 3.A.1.1.29
STP HRGMv2_4314_19 HRGMv2_4314_19_5 4674 6257 + SBP_bac_1
TF HRGMv2_4314_19 HRGMv2_4314_19_6 6483 7460 + LacI
CAZyme HRGMv2_4314_19 HRGMv2_4314_19_7 7541 9247 + GH53
CAZyme HRGMv2_4314_19 HRGMv2_4314_19_8 9341 11359 + GH42
CAZyme HRGMv2_4314_19 HRGMv2_4314_19_9 11391 12740 + GH53
CAZyme HRGMv2_4314_19 HRGMv2_4314_19_10 12805 14130 + GH53
Gene ID: HRGMv2_4314_19_3
Type: TC
Location: 2582 - 3640 (+)
Gene ID: HRGMv2_4314_19_4
Type: TC
Location: 3652 - 4572 (+)
Gene ID: HRGMv2_4314_19_5
Type: STP
Location: 4674 - 6257 (+)
Gene ID: HRGMv2_4314_19_6
Type: TF
Location: 6483 - 7460 (+)
Gene ID: HRGMv2_4314_19_7
Type: CAZyme
Location: 7541 - 9247 (+)
Gene ID: HRGMv2_4314_19_8
Type: CAZyme
Location: 9341 - 11359 (+)
Gene ID: HRGMv2_4314_19_9
Type: CAZyme
Location: 11391 - 12740 (+)
Gene ID: HRGMv2_4314_19_10
Type: CAZyme
Location: 12805 - 14130 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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