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Cluster: HRGMv2_4314_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_18 HRGMv2_4314_18_63 59813 60244 - 1.A.22.1.8
pfam HRGMv2_4314_18 HRGMv2_4314_18_64 60606 61445 + PRD | PRD | CAT_RBD
TC HRGMv2_4314_18 HRGMv2_4314_18_65 61474 61959 + 4.A.1.2.11
TC HRGMv2_4314_18 HRGMv2_4314_18_66 62026 63495 + 4.A.1.1.7
pfam HRGMv2_4314_18 HRGMv2_4314_18_67 63664 64479 - Lactamase_B_2 | Lactamase_B_3
CAZyme HRGMv2_4314_18 HRGMv2_4314_18_68 64683 67832 - GH146
TF HRGMv2_4314_18 HRGMv2_4314_18_69 67992 68828 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) HRGMv2_4314_18 HRGMv2_4314_18_70 68851 69528 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4314_18 HRGMv2_4314_18_71 70054 71277 + 2.A.27.1.3
Gene ID: HRGMv2_4314_18_63
Type: TC
Location: 59813 - 60244 (-)
Gene ID: HRGMv2_4314_18_64
Type: pfam
Location: 60606 - 61445 (+)
Gene ID: HRGMv2_4314_18_65
Type: TC
Location: 61474 - 61959 (+)
Gene ID: HRGMv2_4314_18_66
Type: TC
Location: 62026 - 63495 (+)
Gene ID: HRGMv2_4314_18_67
Type: pfam
Location: 63664 - 64479 (-)
Gene ID: HRGMv2_4314_18_68
Type: CAZyme
Location: 64683 - 67832 (-)
Gene ID: HRGMv2_4314_18_69
Type: TF
Location: 67992 - 68828 (+)
Gene ID: HRGMv2_4314_18_70
Type:
Location: 68851 - 69528 (-)
Gene ID: HRGMv2_4314_18_71
Type: TC
Location: 70054 - 71277 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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