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Cluster: HRGMv2_4314_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_14 HRGMv2_4314_14_56 62139 63641 - 1.I.1.1.3
pfam HRGMv2_4314_14 HRGMv2_4314_14_57 63967 65166 - Radical_SAM
pfam HRGMv2_4314_14 HRGMv2_4314_14_58 65247 65756 - Flavodoxin_1 | Flavodoxin_3 | Flavodoxin_5
TC HRGMv2_4314_14 HRGMv2_4314_14_59 65788 66558 - 3.A.1.14.7
TC HRGMv2_4314_14 HRGMv2_4314_14_60 66548 67534 - 3.A.1.14.10
TC HRGMv2_4314_14 HRGMv2_4314_14_61 67536 68519 - 3.A.1.14.10
TF HRGMv2_4314_14 HRGMv2_4314_14_62 68679 69320 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4314_14 HRGMv2_4314_14_63 69724 70869 - GH5_54
CAZyme HRGMv2_4314_14 HRGMv2_4314_14_64 71188 72513 - GH30_1
NULL(UNKNOWN) HRGMv2_4314_14 HRGMv2_4314_14_65 72529 74172 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4314_14 HRGMv2_4314_14_66 74195 75067 - 3.A.1.1.29
TC HRGMv2_4314_14 HRGMv2_4314_14_67 75082 76002 - 3.A.1.1.29
CAZyme HRGMv2_4314_14 HRGMv2_4314_14_68 76208 78094 - GH154
TF HRGMv2_4314_14 HRGMv2_4314_14_69 78451 79452 - LacI
NULL(UNKNOWN) HRGMv2_4314_14 HRGMv2_4314_14_70 79594 80235 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4314_14 HRGMv2_4314_14_71 80327 81172 - 3.A.1.5.20
TC HRGMv2_4314_14 HRGMv2_4314_14_72 81187 82134 - 3.A.1.5.20
TC HRGMv2_4314_14 HRGMv2_4314_14_73 82138 83157 - 3.A.1.5.12
TC HRGMv2_4314_14 HRGMv2_4314_14_74 83144 84121 - 3.A.1.5.20
TC HRGMv2_4314_14 HRGMv2_4314_14_75 84142 85785 - 3.A.1.5.22
Gene ID: HRGMv2_4314_14_56
Type: TC
Location: 62139 - 63641 (-)
Gene ID: HRGMv2_4314_14_57
Type: pfam
Location: 63967 - 65166 (-)
Gene ID: HRGMv2_4314_14_58
Type: pfam
Location: 65247 - 65756 (-)
Gene ID: HRGMv2_4314_14_59
Type: TC
Location: 65788 - 66558 (-)
Gene ID: HRGMv2_4314_14_60
Type: TC
Location: 66548 - 67534 (-)
Gene ID: HRGMv2_4314_14_61
Type: TC
Location: 67536 - 68519 (-)
Gene ID: HRGMv2_4314_14_62
Type: TF
Location: 68679 - 69320 (+)
Gene ID: HRGMv2_4314_14_63
Type: CAZyme
Location: 69724 - 70869 (-)
Gene ID: HRGMv2_4314_14_64
Type: CAZyme
Location: 71188 - 72513 (-)
Gene ID: HRGMv2_4314_14_65
Type:
Location: 72529 - 74172 (-)
Gene ID: HRGMv2_4314_14_66
Type: TC
Location: 74195 - 75067 (-)
Gene ID: HRGMv2_4314_14_67
Type: TC
Location: 75082 - 76002 (-)
Gene ID: HRGMv2_4314_14_68
Type: CAZyme
Location: 76208 - 78094 (-)
Gene ID: HRGMv2_4314_14_69
Type: TF
Location: 78451 - 79452 (-)
Gene ID: HRGMv2_4314_14_70
Type:
Location: 79594 - 80235 (-)
Gene ID: HRGMv2_4314_14_71
Type: TC
Location: 80327 - 81172 (-)
Gene ID: HRGMv2_4314_14_72
Type: TC
Location: 81187 - 82134 (-)
Gene ID: HRGMv2_4314_14_73
Type: TC
Location: 82138 - 83157 (-)
Gene ID: HRGMv2_4314_14_74
Type: TC
Location: 83144 - 84121 (-)
Gene ID: HRGMv2_4314_14_75
Type: TC
Location: 84142 - 85785 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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