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Cluster: HRGMv2_4314_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_11 HRGMv2_4314_11_39 51922 52512 + 3.A.1.6.1
pfam HRGMv2_4314_11 HRGMv2_4314_11_40 52530 53531 - Zn_dep_PLPC
TC HRGMv2_4314_11 HRGMv2_4314_11_41 54090 54857 + 2.A.79.1.5
pfam HRGMv2_4314_11 HRGMv2_4314_11_42 54909 55352 + ThrE | ThrE_2
pfam HRGMv2_4314_11 HRGMv2_4314_11_43 55399 55953 + DUF3877
TC HRGMv2_4314_11 HRGMv2_4314_11_44 56047 57531 + 1.B.52.2.1
pfam HRGMv2_4314_11 HRGMv2_4314_11_45 57545 58153 + CpXC
NULL(UNKNOWN) HRGMv2_4314_11 HRGMv2_4314_11_46 58189 58416 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4314_11 HRGMv2_4314_11_47 58547 59686 + GH105
Gene ID: HRGMv2_4314_11_39
Type: TC
Location: 51922 - 52512 (+)
Gene ID: HRGMv2_4314_11_40
Type: pfam
Location: 52530 - 53531 (-)
Gene ID: HRGMv2_4314_11_41
Type: TC
Location: 54090 - 54857 (+)
Gene ID: HRGMv2_4314_11_42
Type: pfam
Location: 54909 - 55352 (+)
Gene ID: HRGMv2_4314_11_43
Type: pfam
Location: 55399 - 55953 (+)
Gene ID: HRGMv2_4314_11_44
Type: TC
Location: 56047 - 57531 (+)
Gene ID: HRGMv2_4314_11_45
Type: pfam
Location: 57545 - 58153 (+)
Gene ID: HRGMv2_4314_11_46
Type:
Location: 58189 - 58416 (+)
Gene ID: HRGMv2_4314_11_47
Type: CAZyme
Location: 58547 - 59686 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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