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Cluster: HRGMv2_4314_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_2 HRGMv2_4314_2_58 72015 72896 + 3.A.1.1.45
TC HRGMv2_4314_2 HRGMv2_4314_2_59 72896 73756 + 3.A.1.1.45
CAZyme HRGMv2_4314_2 HRGMv2_4314_2_60 73786 75333 + GH32
TF HRGMv2_4314_2 HRGMv2_4314_2_61 75334 76311 + LacI
STP HRGMv2_4314_2 HRGMv2_4314_2_62 76429 77385 + PfkB
CAZyme HRGMv2_4314_2 HRGMv2_4314_2_63 77413 79089 + GH13_31
CAZyme HRGMv2_4314_2 HRGMv2_4314_2_64 79569 81764 + GH36
CAZyme HRGMv2_4314_2 HRGMv2_4314_2_65 82366 83853 + GH13_18
Gene ID: HRGMv2_4314_2_58
Type: TC
Location: 72015 - 72896 (+)
Gene ID: HRGMv2_4314_2_59
Type: TC
Location: 72896 - 73756 (+)
Gene ID: HRGMv2_4314_2_60
Type: CAZyme
Location: 73786 - 75333 (+)
Gene ID: HRGMv2_4314_2_61
Type: TF
Location: 75334 - 76311 (+)
Gene ID: HRGMv2_4314_2_62
Type: STP
Location: 76429 - 77385 (+)
Gene ID: HRGMv2_4314_2_63
Type: CAZyme
Location: 77413 - 79089 (+)
Gene ID: HRGMv2_4314_2_64
Type: CAZyme
Location: 79569 - 81764 (+)
Gene ID: HRGMv2_4314_2_65
Type: CAZyme
Location: 82366 - 83853 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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