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Cluster: HRGMv2_4314_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_9 HRGMv2_4314_9_16 18515 19834 + 3.A.1.1.6
TC HRGMv2_4314_9 HRGMv2_4314_9_17 19839 20666 + 3.A.1.1.6
TC HRGMv2_4314_9 HRGMv2_4314_9_18 20723 22000 + 3.A.1.1.1
CAZyme HRGMv2_4314_9 HRGMv2_4314_9_19 22044 23765 + CBM34 | GH13_20
CAZyme HRGMv2_4314_9 HRGMv2_4314_9_20 23768 24391 + CBM26
TF HRGMv2_4314_9 HRGMv2_4314_9_21 24441 25358 - LacI
CAZyme HRGMv2_4314_9 HRGMv2_4314_9_22 25532 27712 + CBM20 | GH13_2
CAZyme HRGMv2_4314_9 HRGMv2_4314_9_23 28009 30171 + CBM20 | GH13_2
Gene ID: HRGMv2_4314_9_16
Type: TC
Location: 18515 - 19834 (+)
Gene ID: HRGMv2_4314_9_17
Type: TC
Location: 19839 - 20666 (+)
Gene ID: HRGMv2_4314_9_18
Type: TC
Location: 20723 - 22000 (+)
Gene ID: HRGMv2_4314_9_19
Type: CAZyme
Location: 22044 - 23765 (+)
Gene ID: HRGMv2_4314_9_20
Type: CAZyme
Location: 23768 - 24391 (+)
Gene ID: HRGMv2_4314_9_21
Type: TF
Location: 24441 - 25358 (-)
Gene ID: HRGMv2_4314_9_22
Type: CAZyme
Location: 25532 - 27712 (+)
Gene ID: HRGMv2_4314_9_23
Type: CAZyme
Location: 28009 - 30171 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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