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Cluster: HRGMv2_4314_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4314_4 HRGMv2_4314_4_100 135787 137697 + GH2
pfam HRGMv2_4314_4 HRGMv2_4314_4_101 137681 138649 + Bgal_small_N
TC HRGMv2_4314_4 HRGMv2_4314_4_102 138919 140718 + 8.A.59.2.1
TF HRGMv2_4314_4 HRGMv2_4314_4_103 140715 142283 + 0035607
TC HRGMv2_4314_4 HRGMv2_4314_4_104 142447 144141 + 3.A.1.1.29
TC HRGMv2_4314_4 HRGMv2_4314_4_105 144220 145170 + 3.A.1.1.29
TC HRGMv2_4314_4 HRGMv2_4314_4_106 145188 146099 + 3.A.1.1.29
CAZyme HRGMv2_4314_4 HRGMv2_4314_4_107 146133 146942 + CE1
Gene ID: HRGMv2_4314_4_100
Type: CAZyme
Location: 135787 - 137697 (+)
Gene ID: HRGMv2_4314_4_101
Type: pfam
Location: 137681 - 138649 (+)
Gene ID: HRGMv2_4314_4_102
Type: TC
Location: 138919 - 140718 (+)
Gene ID: HRGMv2_4314_4_103
Type: TF
Location: 140715 - 142283 (+)
Gene ID: HRGMv2_4314_4_104
Type: TC
Location: 142447 - 144141 (+)
Gene ID: HRGMv2_4314_4_105
Type: TC
Location: 144220 - 145170 (+)
Gene ID: HRGMv2_4314_4_106
Type: TC
Location: 145188 - 146099 (+)
Gene ID: HRGMv2_4314_4_107
Type: CAZyme
Location: 146133 - 146942 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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