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Cluster: HRGMv2_4314_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4314_4 HRGMv2_4314_4_80 115697 116398 - 3.A.1.122.14
STP HRGMv2_4314_4 HRGMv2_4314_4_81 116516 117124 + TetR_N
NULL(UNKNOWN) HRGMv2_4314_4 HRGMv2_4314_4_82 117360 118181 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4314_4 HRGMv2_4314_4_83 118200 118913 + 9.B.20.1.4
pfam HRGMv2_4314_4 HRGMv2_4314_4_84 119016 119567 + Ribosomal_L25p | Ribosomal_TL5_C
TF HRGMv2_4314_4 HRGMv2_4314_4_85 119763 120566 - HTH_AraC
CAZyme HRGMv2_4314_4 HRGMv2_4314_4_86 120809 121930 + GH88
CAZyme HRGMv2_4314_4 HRGMv2_4314_4_87 121951 124038 + GH154
TC HRGMv2_4314_4 HRGMv2_4314_4_88 124110 125675 - 2.A.66.2.17
Gene ID: HRGMv2_4314_4_80
Type: TC
Location: 115697 - 116398 (-)
Gene ID: HRGMv2_4314_4_81
Type: STP
Location: 116516 - 117124 (+)
Gene ID: HRGMv2_4314_4_82
Type:
Location: 117360 - 118181 (+)
Gene ID: HRGMv2_4314_4_83
Type: TC
Location: 118200 - 118913 (+)
Gene ID: HRGMv2_4314_4_84
Type: pfam
Location: 119016 - 119567 (+)
Gene ID: HRGMv2_4314_4_85
Type: TF
Location: 119763 - 120566 (-)
Gene ID: HRGMv2_4314_4_86
Type: CAZyme
Location: 120809 - 121930 (+)
Gene ID: HRGMv2_4314_4_87
Type: CAZyme
Location: 121951 - 124038 (+)
Gene ID: HRGMv2_4314_4_88
Type: TC
Location: 124110 - 125675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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