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Cluster: HRGMv2_4314_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4314_1 HRGMv2_4314_1_1 295 1827 + CBM91 | GH43_10
CAZyme HRGMv2_4314_1 HRGMv2_4314_1_2 1911 3020 + GH8
CAZyme HRGMv2_4314_1 HRGMv2_4314_1_3 3075 5012 + CE20 | CE20
TF HRGMv2_4314_1 HRGMv2_4314_1_4 5018 5887 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_4314_1 HRGMv2_4314_1_5 6000 8048 + GH67
CAZyme HRGMv2_4314_1 HRGMv2_4314_1_6 8145 10304 + GH3
pfam HRGMv2_4314_1 HRGMv2_4314_1_7 10459 10878 + HIT
pfam HRGMv2_4314_1 HRGMv2_4314_1_8 11058 12038 + GFO_IDH_MocA | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3
CAZyme HRGMv2_4314_1 HRGMv2_4314_1_9 12196 13731 + CBM91 | GH43_12
TC HRGMv2_4314_1 HRGMv2_4314_1_10 13901 14455 + 2.A.51.1.6
TC HRGMv2_4314_1 HRGMv2_4314_1_11 14452 15009 + 2.A.51.1.6
TF HRGMv2_4314_1 HRGMv2_4314_1_12 15298 15813 + 0044258
TC HRGMv2_4314_1 HRGMv2_4314_1_13 16044 16757 + 3.A.1.147.6
TC HRGMv2_4314_1 HRGMv2_4314_1_14 16750 18339 + 3.A.1.147.6
pfam HRGMv2_4314_1 HRGMv2_4314_1_15 18370 19500 + Complex1_51K
TC HRGMv2_4314_1 HRGMv2_4314_1_16 19510 20190 - 3.A.1.124.5
Gene ID: HRGMv2_4314_1_1
Type: CAZyme
Location: 295 - 1827 (+)
Gene ID: HRGMv2_4314_1_2
Type: CAZyme
Location: 1911 - 3020 (+)
Gene ID: HRGMv2_4314_1_3
Type: CAZyme
Location: 3075 - 5012 (+)
Gene ID: HRGMv2_4314_1_4
Type: TF
Location: 5018 - 5887 (-)
Gene ID: HRGMv2_4314_1_5
Type: CAZyme
Location: 6000 - 8048 (+)
Gene ID: HRGMv2_4314_1_6
Type: CAZyme
Location: 8145 - 10304 (+)
Gene ID: HRGMv2_4314_1_7
Type: pfam
Location: 10459 - 10878 (+)
Gene ID: HRGMv2_4314_1_8
Type: pfam
Location: 11058 - 12038 (+)
Gene ID: HRGMv2_4314_1_9
Type: CAZyme
Location: 12196 - 13731 (+)
Gene ID: HRGMv2_4314_1_10
Type: TC
Location: 13901 - 14455 (+)
Gene ID: HRGMv2_4314_1_11
Type: TC
Location: 14452 - 15009 (+)
Gene ID: HRGMv2_4314_1_12
Type: TF
Location: 15298 - 15813 (+)
Gene ID: HRGMv2_4314_1_13
Type: TC
Location: 16044 - 16757 (+)
Gene ID: HRGMv2_4314_1_14
Type: TC
Location: 16750 - 18339 (+)
Gene ID: HRGMv2_4314_1_15
Type: pfam
Location: 18370 - 19500 (+)
Gene ID: HRGMv2_4314_1_16
Type: TC
Location: 19510 - 20190 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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