Cluster: HRGMv2_4312_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4312
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4312_7 | HRGMv2_4312_7_97 | 75190 | 76536 | - | GH32 |
| TC | HRGMv2_4312_7 | HRGMv2_4312_7_98 | 76609 | 77709 | - | 3.A.1.1.27 |
| TC | HRGMv2_4312_7 | HRGMv2_4312_7_99 | 77714 | 78565 | - | 3.A.1.1.20 |
| TC | HRGMv2_4312_7 | HRGMv2_4312_7_100 | 78537 | 79436 | - | 3.A.1.1.20 |
Gene ID: HRGMv2_4312_7_97
Type: CAZyme
Location: 75190 - 76536 (-)
Type: CAZyme
Location: 75190 - 76536 (-)
Gene ID: HRGMv2_4312_7_98
Type: TC
Location: 76609 - 77709 (-)
Type: TC
Location: 76609 - 77709 (-)
Gene ID: HRGMv2_4312_7_99
Type: TC
Location: 77714 - 78565 (-)
Type: TC
Location: 77714 - 78565 (-)
Gene ID: HRGMv2_4312_7_100
Type: TC
Location: 78537 - 79436 (-)
Type: TC
Location: 78537 - 79436 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_B
Species
Lachnoclostridium_B sp019423745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4312_7_98 | vegan > omnivore | 1.48686 | 0.03201 |